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Job DescriptionP37769
Confidence99.37%DateThu Jan 5 11:57:37 GMT 2012
Rank212Aligned Residues197
% Identity15%Templatec3rfxB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:uronate dehydrogenase; PDBTitle: crystal structure of uronate dehydrogenase from agrobacterium2 tumefaciens, y136a mutant complexed with nad
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  KVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLDRAVAEFGHIDILV
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Template Sequence  KRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPL. . . . . . . DPAGPNEECVQCDLADAN. . . . . . . AVNAMVAGCDGIV
Template Known Secondary structure  STTSTGGGSS

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   4.....10.........20.........30........ .40.........50...... ...60.........
 
   91........100.........110.........120.........130.........140.........150.... ....
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Query Sequence  NNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR. . . . . . . . . . . . VPSY
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Template Sequence  HLGGISVEKPFEQ. . . . . . . . . . . . . ILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLA
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GGGGTTSBTTS
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   70.........80.. .......90.........100.........110.........120.........130......
 
   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  TASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPIVFLASSASDY
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Template Sequence  GVSKCFGENLARMYFDKF. . . GQETALVRIGSCTPEPNNYRMLST. . . . . . . . . . . . . . WFSHDDFVSLIEAVF. . RAPV
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B
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   137..140.........150.... .....160.........170........ .180.........190... ....
 
   239240.........250...
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Query Sequence  VNGYTIAVDGGWLAR
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Template Sequence  LGCPVVWGASANDAG
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   198.200.........210..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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