 |
Job Description | P37769 | Confidence | 96.31% | Date | Thu Jan 5 11:57:37 GMT 2012 |
Rank | 350 | Aligned Residues | 70 |
% Identity | 16% | Template | c3pwzA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:shikimate dehydrogenase 3; |
PDBTitle: crystal structure of an ael1 enzyme from pseudomonas putida
|
Resolution | 1.71 Å |
|
 |
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | E | G | K | V | A | V | V | T | G | C | D | T | G | L | G | Q | G | M | A | L | G | L | A | Q | A | G | C | . |
D | I | V | G | I | N | I | V | E | P | T | E | T | I | E | Q | V | T | A | L | G | R | R | F | L | S | L | T | A | D | L | R | K | I | D | G | I | P | A | L | L | D |
Query Conservation |   |
  |
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |
|   |
|   |   |
|   |   |   |
|
| . |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |
|   |
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
Template Sequence |   |
P | L | R | N | R | R | V | L | L | L | G | A | G | . |
G | A | V | R | G | A | L | L | P | F | L | Q | A | G | P | S | E | L | V | I | A | N | R | D | M | A | K | A | L | A | L | R | N | E | L | D | H | S | R | L | R | I | S | R | Y | E | A | L | E | G | Q | S | F | D | I | V | V | N |
Template Known Secondary structure |   |
|
| T | T | S |  |  |  |  |  |
|
| S | . |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |  |  |  |  |
| S | G | G | G | T | T |
|
|
| S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
| . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|