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Job DescriptionP37769
Confidence100.00%DateThu Jan 5 11:57:37 GMT 2012
Rank151Aligned Residues240
% Identity24%Templatec3m1aF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:putative dehydrogenase; PDBTitle: the crystal structure of a short-chain dehydrogenase from2 streptomyces avermitilis to 2a
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  KVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLDRAVAEFGHIDILV
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Template Sequence  KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRT. EALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLV
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TTTTSTT
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   6...10.........20.........30......... 40.........50.........60.........70.........80....
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  NNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTR
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Template Sequence  NNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQXRERGSG. SVVNISSFGGQLSFAGFSAYSATKAALEQLSE
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   85....90.........100.........110.........120.........130. ........140.........150.........160...
 
   171........180.........190.........200 .........210.........220......... 230..
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Query Sequence  LMANEWAKHNINVNAIAPGYMATNNTQQLR. . . . . . ADEQRSAEILDRIPAGRWGLPSDLMGPIV. . . . . . . . . . . . FLA
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Template Sequence  GLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQQPGDPAKAAAAIRLALDTEKTPLRLALG
Template Known Secondary structure  GGGT

B

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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   233......240.........250..
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Query Sequence  SSASDYVNGYTIAVDGGWLA
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Template Sequence  GDAVDFLTGHLDSVRAELTE
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   249250.........260........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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