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Job DescriptionP37769
Confidence100.00%DateThu Jan 5 11:57:37 GMT 2012
Rank21Aligned Residues248
% Identity21%Templatec3lf2B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short chain oxidoreductase q9hya2; PDBTitle: nadph bound structure of the short chain oxidoreductase q9hya2 from2 pseudomonas aeruginosa pao1 containing an atypical catalytic center
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40... ......50.........60.........70... ......80.
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Query Sequence  AFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIV. . EPTETIEQVTALGRRFLSLTADLRKIDGIP. ALLDRAVA
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Template Sequence  PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  EFGHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTAS
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Template Sequence  RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAA
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   162.......170.........180.........190.........200. ........210.........220.........230.
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Query Sequence  KSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRA. . . . . . . . . . DEQRSAEILDRIPAGRWGLPSDLMGPIVFL
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Template Sequence  RAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFL
Template Known Secondary structure  GGGT

SB
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   232.......240.........250..
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Query Sequence  ASSASDYVNGYTIAVDGGWLA
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Template Sequence  ASPLSAYTTGSHIDVSGGLSR
Template Known Secondary structure  SGGGTT

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   243......250.........260...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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