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Job DescriptionP37769
Confidence100.00%DateThu Jan 5 11:57:37 GMT 2012
Rank150Aligned Residues239
% Identity24%Templatec3kvoB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:hydroxysteroid dehydrogenase-like protein 2; PDBTitle: crystal structure of the catalytic domain of human hydroxysteroid2 dehydrogenase like 2 (hsdl2)
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40... ......50.........60.........70.
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Query Sequence  MILSAFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIV. . . . . . . . . EPTETIEQVTALGRRFLSLTADLRKIDG
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Template Sequence  MLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQ
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STTTT
T
SSTTT
S
SS

SSS


T


TT
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   72.......80.........90.........100.........110.........120.........130.........140.........150.
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Query Sequence  IPALLDRAVAEFGHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQG
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Template Sequence  ISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV
Template Known Secondary structure  S











TTTS
TTT
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T
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   152.......160.........170.........180.........190.........200.........210.........220.........230
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Query Sequence  . GIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPIVF
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Template Sequence  WFKQHCAYTIAKYGMSMYVLGMAEEFKG. EIAVNALWPKTAIHTAAMD. . . . . . . . . MLGGPGIESQCRKVDIIADAA. Y
Template Known Secondary structure  SSTTT.T

SB
B

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TTGGGG
B
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   161........170.........180........ .190.........200....... ..210.........220........ .
 
   231........240.........250.
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Query Sequence  LASSASDYVNGYTIAVDGGWL
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Template Sequence  SIFQKPKSFTGNFV. IDENIL
Template Known Secondary structure  TS
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S
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   230.........240... ......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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