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Job DescriptionP37769
Confidence98.54%DateThu Jan 5 11:57:37 GMT 2012
Rank259Aligned Residues207
% Identity13%Templatec3gpiA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: structure of putative nad-dependent epimerase/dehydratase2 from methylobacillus flagellatus
Resolution1.44 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  KVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLDRAVAEFGHIDILV
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Template Sequence  SKILIAGC. GDLGLELARRLTAQGHEVTGLRRSAQ. . . . . . . . PMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVAAS
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   2....... 10.........20.........30..... ....40.........50.........60.........70..
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  NNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTR
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Template Sequence  EYSLSY. . . . . . . . . . . . . . . . . . . . . . . VEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKR
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   73..... .80.........90.........100.........110.........120.........
 
   171........180.........190.........200.........210.........220.........230.........240.........
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Query Sequence  LMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPIVFLASSASDYVNGYTIAVDGG
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Template Sequence  MLEAEALLAAYSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDN
Template Known Secondary structure  GGGSS
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   135....140.........150.........160.........170.........180.........190.........200.........210...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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