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Job DescriptionP37769
Confidence100.00%DateThu Jan 5 11:57:37 GMT 2012
Rank62Aligned Residues240
% Identity36%Templatec3emkA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glucose/ribitol dehydrogenase; PDBTitle: 2.5a crystal structure of glucose/ribitol dehydrogenase2 from brucella melitensis
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  SAFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLDRAVAEF
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Template Sequence  SMFDLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTRE. EKLKELAAELGERIFVFPANLSDREAVKALGQKAEEEM
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TT

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   0.........10.........20.........30.........40 .........50.........60.........70........
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  GHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKS
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Template Sequence  GGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRELTHPMMRRRN. GRIINITSIVGVTGNPGQANYCASKA
Template Known Secondary structure  TS










GGG

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   7980.........90.........100.........110.........120.........130. ........140.........150.......
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  GVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPIVFLASSASDYVNGYT
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Template Sequence  GLIGFSKSLAQEIASRNVTVNCIAPGFIESAMEKQ. . . . . . . KDAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQT
Template Known Secondary structure  GGGT
SBSS


.......TT
TT
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B
SGGGTT

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   158.160.........170.........180.........190.. .......200.........210.........220.........230
 
   244.....250..
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Query Sequence  IAVDGGWLA
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Template Sequence  LHVNGGMAM
Template Known Secondary structure  STTSS
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   236...240....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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