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Job DescriptionP37769
Confidence98.45%DateThu Jan 5 11:57:37 GMT 2012
Rank266Aligned Residues218
% Identity12%Templatec3a1nB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:ndp-sugar epimerase; PDBTitle: crystal structure of l-threonine dehydrogenase from2 hyperthermophilic archaeon thermoplasma volcanium
Resolution2.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70.........80.........90.
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Query Sequence  VAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLDRAVAEFGHIDILVN
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Template Sequence  MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIV. . . . . . . QRDTGGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGIL
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   1........10.........20.........30.... .....40.........50.........60.........70...
 
   92.......100.........110.........120.........130.........140.........150 .........160
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Query Sequence  NAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQ. . . . . . . . . . . GGIRVPSYTA
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Template Sequence  . . . . . . . . . . . . . SAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMYGVT
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   74.....80.........90.........100.........110.........120.........130.........140
 
   161........170.........180.........190.........200.........210... ......220.........230.
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Query Sequence  SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRI. . . . . . . . . PAGRWGLPSDLMGPIVFL
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Template Sequence  KIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDL
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   141........150.........160.........170.........180.........190.........200.........210.........220
 
   232.......240.........
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Query Sequence  ASSASDYVNGYTIAVDGG
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Template Sequence  YEADRDKLVLRNGYNVTA
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   221........230........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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