Job Description P37769 Confidence 98.93% Date Thu Jan 5 11:57:37 GMT 2012 Rank 234 Aligned Residues 219 % Identity 11% Template c2z1mC_ PDB info PDB header:lyase Chain: C: PDB Molecule:gdp-d-mannose dehydratase; PDBTitle: crystal structure of gdp-d-mannose dehydratase from aquifex aeolicus2 vf5 Resolution 2.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	V	A	V	V	T	G	C	D	T	G	L	G	Q	G	M	A	L	G	L	A	Q	A	G	C	D	I	V	G	I	N	I	V	E	P	T	E	T	I	E	Q	V	T	A	L	G	R	R	F	L	S	L	T	A	D	L	R	K	I	D	G	I	P	A	L	L	D	R	A	V	A	E	F	G	H	I	D	I	L
Query Conservation
Alig confidence																																								.	.	.	.	.
Template Conservation																																								.	.	.	.	.
Template Sequence		G	K	R	A	L	I	T	G	I	R	G	Q	D	G	A	Y	L	A	K	L	L	L	E	K	G	Y	E	V	Y	G	A	D	S	W	R	L	K	E	.	.	.	.	.	L	G	I	E	N	D	V	K	I	I	H	M	D	L	L	E	F	S	N	I	I	R	T	I	E	K	V	Q	P	D	E	V	Y	N	L	A	A
Template Known Secondary structure									T	T	T	S													T	T														.	.	.	.	.	T	T		T	T	T	S							T	T															S
Template Predicted Secondary structure																																								.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.												.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	N	A	G	L	I	R	R	E	D	A	L	E	F	S	E	K	D	W	D	D	V	M	N	L	N	I	K	S	V	F	F	M	S	Q	A	A	A	K	H	F	I	A	Q	G	N	G	G	K	I	I	N	I	A	S	M	L	.	.	.	.	.	.	.	.	.	.	.	S	F	Q	G	G	I	R	V	P	S	Y
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	S	F	.	.	.	.	.	.	.	.	.	.	.	.	V	G	V	S	F	E	Q	P	I	L	T	A	E	V	D	A	I	G	V	L	R	I	L	E	A	L	R	T	V	K	P	D	T	K	F	Y	Q	A	S	T	S	E	M	F	G	K	V	Q	E	I	P	Q	T	E	K	T	P	F	Y	P	R	S	P	Y	A
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.							S									T															T	T									G	G	G	T		S		S	S	S	S	B		T	T	S						S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.													.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220										.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.
Query Sequence		T	A	S	K	S	G	V	M	G	V	T	R	L	M	A	N	E	W	A	K	H	N	I	N	V	N	A	I	A	P	G	Y	M	A	T	N	N	T	Q	Q	L	R	A	D	E	Q	R	S	A	E	I	L	D	R	I	P	A	G	R	W	G	L	.	.	.	.	.	.	.	.	.	P	S	D	L	M	G	P	I	V
Query Conservation																																																																.	.	.	.	.	.	.	.	.
Alig confidence																																																																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	K	L	F	G	H	W	I	T	V	N	Y	R	E	A	Y	N	M	F	A	C	S	G	I	L	F	N	H	E	S	P	L	R	G	I	E	F	V	T	R	K	I	T	Y	S	L	A	R	I	K	Y	G	L	Q	D	K	L	V	L	G	N	L	N	A	K	R	D	W	G	Y	A	P	E	Y	V	E	A	M	W
Template Known Secondary structure																																	T	T	S		T	T	S														T	T	S		S					S		T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	A	S	S	A	S	D	Y	V	N	G	Y	T	I	A	V	D	G	G
Query Conservation
Alig confidence								.	.	.	.
Template Conservation								.	.	.	.
Template Sequence		L	M	M	Q	Q	P	.	.	.	.	E	P	D	D	Y	V	I	A	T	G
Template Known Secondary structure					T	S	S	.	.	.	.	S							S		S
Template Predicted Secondary structure								.	.	.	.
Template SS confidence
		233	.	.	.	.	.					.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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