Job Description P37769 Confidence 98.19% Date Thu Jan 5 11:57:37 GMT 2012 Rank 283 Aligned Residues 218 % Identity 11% Template c2yy7B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:l-threonine dehydrogenase; PDBTitle: crystal structure of thermolabile l-threonine dehydrogenase from2 flavobacterium frigidimaris kuc-1 Resolution 2.06 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	V	A	V	V	T	G	C	D	T	G	L	G	Q	G	M	A	L	G	L	A	Q	A	G	C	D	I	V	G	I	N	I	V	E	P	T	E	T	I	E	Q	V	T	A	L	G	R	R	F	L	S	L	T	A	D	L	R	K	I	D	G	I	P	A	L	L	D	R	A	V	A	E	F	G	H	I	D	I	L
Query Conservation
Alig confidence																																															.	.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		N	P	K	I	L	I	I	G	A	C	G	Q	I	G	T	E	L	T	Q	K	L	R	K	L	Y	G	T	E	N	V	I	A	S	D	I	R	K	L	N	T	D	V	V	N	S	.	.	.	.	G	P	F	E	V	V	N	A	L	D	F	N	Q	I	E	H	L	V	E	V	H	K	I	T	D	I	Y	L	M	A	A
Template Known Secondary structure									T	T	T	S																G	G	G						S				S						T	.	.	.	.	S							T	T												T	T
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.													.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	N	A	G	L	I	R	R	E	D	A	L	E	F	S	E	K	D	W	D	D	V	M	N	L	N	I	K	S	V	F	F	M	S	Q	A	A	A	K	H	F	I	A	Q	G	N	G	G	K	I	I	N	I	A	S	M	L	S	F	Q	G	G	I	.	.	.	.	.	.	.	.	.	.	.	.	R	V	P	S
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	S	A	T	A	E	K	N	P	A	F	A	W	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	M	N	S	L	F	H	V	L	N	L	A	K	A	K	K	I	K	K	I	F	W	P	S	S	I	A	V	F	G	P	T	T	P	K	E	N	T	P	Q	Y	T	I	M	E	P	S	T	V
Template Known Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	S		S								G	G	G			T	T	S		S	S	S	B		S	S							S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.																.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.														.	220	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	T	A	S	K	S	G	V	M	G	V	T	R	L	M	A	N	E	W	A	K	H	N	I	N	V	N	A	I	A	P	G	Y	M	A	T	N	N	T	Q	Q	L	R	A	D	E	Q	R	S	A	E	I	L	D	R	I	P	A	G	R	W	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	P	S	D	L
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.
Template Sequence		Y	G	I	S	K	Q	A	G	E	R	W	C	E	Y	Y	H	N	.	.	.	I	Y	G	V	D	V	R	S	I	R	Y	P	G	L	I	S	W	S	T	P	P	G	G	G	T	T	D	Y	A	V	D	I	F	Y	K	A	I	A	D	K	K	Y	E	C	F	L	S	S	E	T	K	M	P	M	M	Y	M	D	D	A
Template Known Secondary structure																			.	.	.																	S	S	S				S		S	S	T												T	S					S	S		T	T
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		M	G	P	I	V	F	L	A	.	S	S	A	S	D	Y	V	N	G	Y	T	I	A	V	D	G	G
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		I	D	A	T	I	N	I	M	K	A	P	V	E	K	I	K	I	H	S	S	Y	N	L	A	A	M
Template Known Secondary structure											S		G	G	G				S	S						S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions