Job Description P37769 Confidence 98.40% Date Thu Jan 5 11:57:37 GMT 2012 Rank 271 Aligned Residues 224 % Identity 12% Template c2pk3B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:gdp-6-deoxy-d-lyxo-4-hexulose reductase; PDBTitle: crystal structure of a gdp-4-keto-6-deoxy-d-mannose reductase Resolution 1.82 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	V	V	T	G	C	D	T	G	L	G	Q	G	M	A	L	G	L	A	Q	A	G	C	D	I	V	G	I	N	I	V	E	P	T	E	T	I	E	Q	V	T	A	L	G	R	R	F	L	S	L	T	A	D	L	R	K	I	D	G	I	P	A	L	L	D	R	A	V	A	E	F	G	H	I	D	I	L	V	N
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.
Template Sequence		R	A	L	I	T	G	V	A	G	F	V	G	K	Y	L	A	N	H	L	T	E	Q	N	V	E	V	F	G	T	S	R	N	N	E	A	.	.	.	.	.	.	.	.	K	L	P	N	V	E	M	I	S	L	D	I	M	D	S	Q	R	V	K	K	V	I	S	D	I	K	P	D	Y	I	F	H	L	A	A	K	S
Template Known Secondary structure							T	T	T	S												T	T	T								S		T	T		.	.	.	.	.	.	.	.			T	T								T	T															S							S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.									.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	G	L	I	R	R	E	D	A	L	E	F	S	E	K	D	W	D	D	V	M	N	L	N	I	K	S	V	F	F	M	S	Q	A	A	A	K	H	F	I	A	Q	G	N	G	G	K	I	I	N	I	A	S	M	L	S	F	Q	G	G	I	R	V	P	S	Y	T	A	S	K	S	G	V	M	G	V	T	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	K	D	S	W	L	N	K	K	G	T	F	S	T	N	V	F	G	T	L	H	V	L	D	A	V	R	D	S	N	L	D	C	R	I	L	T	I	G	S	S	E	E	Y	G	M	I	L	P	E	E	S	P	V	S	E	E	N	Q	L	R	P	M	S	P	Y	G	V	S	K	A	S	V	G	M	L	A	R	Q
Template Known Secondary structure							T	T																								T											G	G	G	T	B	S			G	G	G		S	B		T	T	S			B			S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.															.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	N	E	W	A	K	H	N	I	N	V	N	A	I	A	P	G	Y	M	A	T	N	N	T	Q	Q	L	R	A	D	E	Q	R	S	A	E	I	L	D	R	I	P	A	G	R	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	P	S	D	L	M	G	P	I	V	F	L	A	S	S	A	S	D
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation					.	.	.																																																																						.	.	.
Template Sequence		Y	V	K	.	.	.	A	Y	G	M	D	I	I	H	T	R	T	F	N	H	I	G	P	G	Q	S	L	G	F	V	T	Q	D	F	A	K	Q	I	V	D	I	E	M	E	K	Q	E	P	I	I	K	V	G	N	L	E	A	V	R	D	F	T	D	V	R	D	I	V	Q	A	Y	W	L	L	S	.	.	.	Q	Y
Template Known Secondary structure					.	.	.																	T	T			S	S	S														T	T	S	S		S							S	S																				.	.	.
Template Predicted Secondary structure					.	.	.																																																																						.	.	.
Template SS confidence
		154	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.
		238	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	N	G	Y	T	I	A	V	D	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	T	G	D	V	Y	N	V	C	S	G
Template Known Secondary structure				T	T						S		S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions