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Job DescriptionP37769
Confidence100.00%DateThu Jan 5 11:57:37 GMT 2012
Rank74Aligned Residues242
% Identity33%Templatec2p68A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of aq_1716 from aquifex aeolicus vf5
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.... .....50.........60.........70.........80..
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Query Sequence  FSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVE. . . PTETIEQVTALGRRFLSLTADLRKIDGIPALLDRAVAE
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Template Sequence  IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL
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TT
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TT
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  FGHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASK
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Template Sequence  VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRW. GRIVNISSVVGFTGNVGQVNYSTTK
Template Known Secondary structure  SS

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   83......90.........100.........110.........120.........130...... ...140.........150.........160.
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  SGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPIVFLASSASDYVNGY
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Template Sequence  AGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS. . EEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGE
Template Known Secondary structure  GGGT
SB

GGGGGS
..TT
TTSS
B
SGGGTT

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   162.......170.........180.........190......... 200.........210.........220.........230.........
 
   243......250
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Query Sequence  TIAVDGGW
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Template Sequence  VIHVNGGM
Template Known Secondary structure  STT
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   240.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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