Job Description P37769 Confidence 98.38% Date Thu Jan 5 11:57:37 GMT 2012 Rank 272 Aligned Residues 185 % Identity 15% Template c2p5uC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:udp-glucose 4-epimerase; PDBTitle: crystal structure of thermus thermophilus hb8 udp-glucose 4-2 epimerase complex with nad Resolution 2.37 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	V	V	T	G	C	D	T	G	L	G	Q	G	M	A	L	G	L	A	Q	A	G	C	D	I	V	G	I	N	I	V	E	P	T	E	T	I	E	Q	V	T	A	L	G	R	R	F	L	S	L	T	A	D	L	R	K	I	D	G	I	P	A	L	L	D	R	A	V	A	E	F	G	H	I	D	I	L	V	N
Query Conservation
Alig confidence																																				.	.	.	.
Template Conservation																																				.	.	.	.
Template Sequence		R	V	L	V	T	G	G	A	G	F	I	G	S	H	I	V	E	D	L	L	A	R	G	L	E	V	A	V	L	D	N	L	A	T	.	.	.	.	G	K	R	E	N	V	P	K	G	V	P	F	F	R	V	D	L	R	D	K	E	G	V	E	R	A	F	R	E	F	R	P	T	H	V	S	H	Q	A	A	Q	A
Template Known Secondary structure						T	T	T	T	S													T	T										S	S	.	.	.	.			G	G	G	S		T	T	S							T	T															S							S
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.														.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	G	L	I	R	R	E	D	A	L	E	F	S	E	K	D	W	D	D	V	M	N	L	N	I	K	S	V	F	F	M	S	Q	A	A	A	K	H	F	I	A	Q	G	N	G	G	K	I	I	N	I	A	S	M	L	S	F	Q	G	G	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	S	Y
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	K	V	S	V	E	D	P	V	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	V	N	L	L	G	G	L	N	L	L	E	A	C	R	Q	Y	G	V	E	K	L	V	F	A	S	T	G	G	A	I	Y	G	E	V	P	E	G	E	R	A	E	E	T	W	P	P	R	P	K	S	P	Y
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.					T													T	T		S												T					T	T			B		T	T	S						S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.															90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	S	K	S	G	V	M	G	V	T	R	L	M	A	N	E	W	A	K	H	N	I	N	V	N	A	I	A	P	G	Y	M	A	T	N	N	T	Q	Q	L	R	A	D	E	Q	R	S	A	E	I	L	D	R	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	S	K	A	A	F	E	H	Y	L	S	V	Y	G	Q	S	Y	G	L	K	W	V	S	L	R	Y	G	N	V	Y	G	P	R	Q	D	P	H	G	E	A	G	V	V	A	I	F	A	E	R	V	L	K	G	L	P
Template Known Secondary structure																																		T	T			T	T	S	G	G	G											T	T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions