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Job DescriptionP37769
Confidence100.00%DateThu Jan 5 11:57:37 GMT 2012
Rank36Aligned Residues238
% Identity35%Templatec2c07A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-(acyl-carrier protein) reductase; PDBTitle: oxoacyl-acp reductase of plasmodium falciparum
Resolution1.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40... ......50.........60.........70.........80...
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Query Sequence  FSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIV. . EPTETIEQVTALGRRFLSLTADLRKIDGIPALLDRAVAEF
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Template Sequence  YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH
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STTSTTTSSSSTTT



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   5960.........70.........80.........90.........100.........110.........120.........130........
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  GHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKS
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Template Sequence  KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR. YGRIINISSIVGLTGNVGQANYSSSKA
Template Known Secondary structure  S











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   139140.........150.........160.........170.........180.........190 .........200.........210.......
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  GVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPIVFLASSASDYVNGYT
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Template Sequence  GVIGFTKSLAKELASRNITVNAIAPGFISSIS. . . . . . . EQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRV
Template Known Secondary structure  GGGT
SB



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TTSS
B
SGGGTT

S
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   218.220.........230.........240......... 250.........260.........270.........280.........290
 
   244.....250.
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Query Sequence  IAVDGGWL
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Template Sequence  FVIDGGLS
Template Known Secondary structure  STTS
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   296...300...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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