Job Description P37769 Confidence 99.22% Date Thu Jan 5 11:57:37 GMT 2012 Rank 217 Aligned Residues 226 % Identity 13% Template c1z7eC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:protein arna; PDBTitle: crystal structure of full length arna Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		I	L	S	A	F	S	L	E	G	K	V	A	V	V	T	G	C	D	T	G	L	G	Q	G	M	A	L	G	L	A	Q	A	G	C	.	D	I	V	G	I	N	I	V	E	P	T	E	T	I	E	Q	V	T	A	L	G	R	R	F	L	S	L	T	A	D	L	R	K	I	D	G	I	P	A	L	L	D	R	A	V
Query Conservation																																				.
Alig confidence																																				.												.	.	.																														.	.
Template Conservation																																																.	.	.																														.	.
Template Sequence		L	V	Q	G	S	R	L	R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	.	.	.	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.
Template Known Secondary structure			S	S	S												T	T	T	S													S	S	S								S			T	T	.	.	.	T	G	G	G	T	T		T	T								T	T	T											.	.
Template Predicted Secondary structure																																																.	.	.																														.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.				.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		A	E	F	G	H	I	D	I	L	V	N	N	A	G	L	I	R	R	E	D	A	L	E	F	S	E	K	D	W	D	D	V	M	N	L	N	I	K	S	V	F	F	M	S	Q	A	A	A	K	H	F	I	A	Q	G	N	G	G	K	I	I	N	I	A	S	M	L	S	F	Q	G	G	I	R	V	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence		.	.	.	.																									.	.	.	.	.	.	.	.																				.	.																			.	.	.	.	.
Template Conservation		.	.	.	.																									.	.	.	.	.	.	.	.																				.	.
Template Sequence		.	.	.	.	K	C	D	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	.	.	.	.	.	.	.	.	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D
Template Known Secondary structure		.	.	.	.			S											T						S					.	.	.	.	.	.	.	.					T													T	T	.	.									G	G	G	G	B	T			S	S	S	B		T	T
Template Predicted Secondary structure		.	.	.	.																									.	.	.	.	.	.	.	.																				.	.
Template SS confidence
						382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.									.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
															156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200									.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	Y	T	A	S	K	S	G	V	M	G	V	T	R	L	M	A	N	E	W	A	K	H	N	I	N	V	N	A	I	A	P	G	Y	M	A	T	N	N	T	Q	Q	L	R	.	.	.	.	.	.	.	.	A	D	E	Q	R	S	A	E	I	L	D	R	I	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																						.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.
Template Sequence		H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	E	.	.	.	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P
Template Known Secondary structure		T				B				T	T		T	T																						.	.	.											S			S	T	T	S	S						T	T	T		S													T
Template Predicted Secondary structure																																				.	.	.
Template SS confidence
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.				.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
		215	.	.	.	.	220										.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.
Query Sequence		A	G	R	W	G	L	.	.	.	.	.	.	.	.	.	P	S	D	L	M	G	P	I	V	F	L	A	S	S	A	S	D	Y	V	N	G	Y	T	I	A	V	D	G	G
Query Conservation								.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P
Template Known Secondary structure						G	G	G																						T	G	G	G	T	T	T	T								G
Template Predicted Secondary structure
Template SS confidence
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions