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Job DescriptionP37769
Confidence100.00%DateThu Jan 5 11:57:37 GMT 2012
Rank32Aligned Residues246
% Identity31%Templatec1w4zA_
PDB info PDB header:antibiotic biosynthesisChain: A: PDB Molecule:ketoacyl reductase; PDBTitle: structure of actinorhodin polyketide (actiii) reductase
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40...... ...50.........60.........70.........80....
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Query Sequence  SLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPT. . ETIEQVTALGRRFLSLTADLRKIDGIPALLDRAVAEFG
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Template Sequence  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG
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SS
S
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S
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T
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   85....90.........100.........110.........120......... 130.........140.........150.........160...
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Query Sequence  HIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAK. HFIAQGNGGKIINIASMLSFQGGIRVPSYTASKS
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Template Sequence  PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKH
Template Known Secondary structure  S
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GGG

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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   164.....170.........180.........190.........200.. .......210.........220.........230....
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Query Sequence  GVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRAD. . . . . . . . . EQRSAEILDRIPAGRWGLPSDLMGPIVFLASS
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Template Sequence  GVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGP
Template Known Secondary structure  GGGT
SB
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TTSTTSS
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   235....240.........250..
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Query Sequence  ASDYVNGYTIAVDGGWLA
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Template Sequence  GAAAVTAQALNVCGGLGN
Template Known Secondary structure  GGTT

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   243......250.........260
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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