 |
| Job Description | Q46798 | | Confidence | 41.37% | Date | Thu Jan 5 12:34:19 GMT 2012 |
| Rank | 78 | Aligned Residues | 42 |
| % Identity | 19% | Template | d1k8ga2 |
| SCOP info | OB-fold
| Nucleic acid-binding proteins
| Single strand DNA-binding domain, SSB
|
| Resolution | 2.60 |
|
|   |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | |
|
|
200 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . | . | . |
|
|
|
|
|  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | K | V | V | Y | V | G | N | Q | L | R | G | Y | G | N | L | I | M | I | K | H | S | E | D | Y | I | T | A | Y | A | H | N | D | T | M | L | . |
. |
. |
V | N | N | G | Q | S | V | K |
| Query Conservation |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |
|   |
|   |
|
|   |   |   |   | . | . | . |
|   |   |
|   |   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|
|   |   |   |
|   |
|
|
|   |
|   |
|
|
|   |
| . | . |
|
|
|
|   |   |   |   |   |
|
|
|
|
|
|
|   |   |
|   |
|
|
|
| Template Sequence |   |
A | K | I | L | Q | V | H | E | L | D | E | Y | T | N | E | L | K | L | K | D | A | S | . |
. |
G | Q | V | F | Y | T | L | S | L | K | L | K | F | P | H | V | R | T | G | E | V | V | R |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |
| T | T | . | . |
|
|  |  |  |  |  |  |  | T | T | T |
| T | T |
|
| T | T |
|  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | |
|
250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|