Job Description Q46798 Confidence 100.00% Date Thu Jan 5 12:34:19 GMT 2012 Rank 4 Aligned Residues 121 % Identity 25% Template c3nyyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative glycyl-glycine endopeptidase lytm; PDBTitle: crystal structure of a putative glycyl-glycine endopeptidase lytm2 (rumgna_02482) from ruminococcus gnavus atcc 29149 at 1.60 a3 resolution Resolution 1.60 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.
Query SS confidence																																						.	.	.	.
Query Sequence		V	G	Q	R	C	W	L	W	P	T	T	G	K	V	I	M	P	Y	S	T	A	D	G	G	N	K	G	I	D	I	S	A	P	R	G	T	.	.	.	.	P	I	Y	A	A	G	A	G	K	V	V	Y	V	G	N	Q	L	R	G	Y	G	N	L	I	M	I	K	H	S	E	D	Y	I	T	A	Y	A	H	N	D
Query Conservation																																						.	.	.	.
Alig confidence																																						.	.	.	.																	.
Template Conservation																																																										.
Template Sequence		D	D	T	E	D	K	I	S	Y	V	D	S	W	X	F	E	R	N	Y	G	G	K	R	G	H	E	G	T	D	I	X	A	E	K	N	T	P	G	Y	Y	P	V	V	S	X	T	D	G	V	V	T	E	K	G	W	L	.	E	K	G	G	W	R	I	G	I	T	A	P	T	G	A	Y	F	Y	Y	A	H	L	D
Template Known Secondary structure		S	S	S															T	T		S		T	T									S	S			T	T		S					S	S											.	T	T	T									T	T	S									S
Template Predicted Secondary structure																																																										.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		197	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220								.	.	.	.	.	.	.	.	.	230	.					.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure				.																						.		.	.	.	.	.	.	.												.	.	.	.
Query SS confidence				.																						.		.	.	.	.	.	.	.												.	.	.	.
Query Sequence		T	M	.	L	V	N	N	G	Q	S	V	K	A	G	Q	K	I	A	T	M	G	S	T	D	.	A	.	.	.	.	.	.	.	A	S	V	R	L	H	F	Q	I	R	Y	.	.	.	.	R	A	T	A	I	D	P	L	R	Y	L
Query Conservation				.																						.		.	.	.	.	.	.	.												.	.	.	.
Alig confidence				.																						.		.	.	.	.	.	.	.												.	.	.	.
Template Conservation
Template Sequence		S	Y	A	E	L	E	K	G	D	P	V	K	A	G	D	L	L	G	Y	X	G	D	S	G	Y	G	E	E	G	T	T	G	E	F	P	V	H	L	H	L	G	I	Y	L	K	E	G	T	E	E	I	S	V	N	P	Y	P	V	L
Template Known Secondary structure					S			T	T					T	T							B				S	S	S	T	T				S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions