Job Description Q46798 Confidence 100.00% Date Thu Jan 5 12:34:19 GMT 2012 Rank 1 Aligned Residues 204 % Identity 31% Template c2gu1A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:zinc peptidase; PDBTitle: crystal structure of a zinc containing peptidase from2 vibrio cholerae Resolution 1.90 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	V	Y	T	V	K	R	G	D	T	L	Y	R	I	S	R	T	T	G	T	S	V	K	E	L	A	R	L	N	G	I	S	.	.	.	.	P	P	Y	T	I	E	V	G	Q	K	L	K	L	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																			.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	H	Y	M	V	K	V	G	D	T	L	S	G	I	F	A	Q	L	G	V	P	Y	S	I	L	Q	K	I	L	S	V	D	L	D	H	L	Q	L	D	M	I	Q	P	G	E	E	L	E	L	M	M	D	D	M	G	Q	L	S	R	L	I	Y	H	M	S	I	V	E	K	A	I	Y	T	R	E	N	D	G	S
Template Known Secondary structure									T	T										T	T													G	G	G	T			G	G	G			T	T									T	T	S											T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
																																																																													87	.	.	90	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	S	S	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	S	Y	D	F	Q	E	I	S	G	E	W	R	E	I	L	F	S	G	E	I	N	G	S	F	S	V	S	A	R	R	V	G	L	T	S	S	Q	V	A	N	I	T	Q	V	M	K	D	K	I	D	F	S	R	S	L	R	A	D	R	F	D	I	L	V	K	Q	Q	Y	L	G	E	H	N	T	G	N	S	E	I
Template Known Secondary structure																						S	S	S									T	T														T	T	T			T	T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.									140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																												.	.	.							.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.							.	.	.	.	.	.	.	.
Query Sequence		I	T	R	K	S	T	A	K	S	T	T	K	T	A	S	V	T	P	S	S	A	V	P	K	S	S	W	P	P	V	G	Q	R	C	W	L	W	P	T	T	G	K	.	.	.	V	I	M	P	Y	S	.	.	.	.	.	.	.	.	T	A	D	G	G	N	K	G	I	D	I	S	A	P	R	G	T	P	I	Y	A
Query Conservation																																												.	.	.							.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	I	S	F	K	L	A	K	G	D	V	S	A	F	L	A	E	D	G	R	F	Y	D	R	A	G	N	S	L	E	R	A	F	N	R	Y	P	V	D	K	A	Y	R	Q	I	T	S	G	F	N	P	K	R	K	H	P	V	T	G	R	V	V	P	H	N	G	T	D	F	A	T	P	I	G	A	P	V	Y	S
Template Known Secondary structure									T	T									T	T	S					T	T	S		B	S	S					S		S	S		G	G	G								B	T	T		B		T	T	T			B			B		S							T	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		A	G	A	G	K	V	V	Y	V	G	N	Q	L	R	G	Y	G	N	L	I	M	I	K	H	S	E	D	Y	I	T	A	Y	A	H	N	D	T	M	L	V	N	N	G	Q	S	V	K	A	G	Q	K	I	A	T	M	G	S	T	D	.	A	A	S	V	R	L	H	F	Q	I	R	Y	R	A	T	A	I	D	P	L
Query Conservation																																																													.
Alig confidence														.																																															.
Template Conservation														.
Template Sequence		T	G	D	G	K	V	I	V	V	R	K	H	.	P	Y	A	G	N	Y	L	V	I	E	H	N	S	V	Y	K	T	R	Y	L	H	L	D	K	I	L	V	K	K	G	Q	L	V	K	R	G	Q	K	I	A	L	A	G	A	T	G	R	L	T	G	P	H	L	H	F	E	V	L	V	R	N	R	P	V	D	A	M
Template Known Secondary structure		S	S	S										.	T	T	T									S	S	S									S						T	T					T	T										S	S		S	S										T	T					T	T
Template Predicted Secondary structure														.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		240		.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		R	.	Y	L	P
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		K	A	D	L	P
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions