Return to main results Retrieve Phyre Job Id

Job DescriptionP27840
Confidence4.94%DateThu Jan 5 11:44:16 GMT 2012
Rank87Aligned Residues24
% Identity29%Templatec3thtB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:alkylated dna repair protein alkb homolog 8; PDBTitle: crystal structure and rna binding properties of the rrm/alkb domains2 in human abh8, an enzyme catalyzing trna hypermodification, northeast3 structural genomics consortium target hr5601b
Resolution3.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   231........240... ......250....
Predicted Secondary structure 







...




Query SS confidence 












. . .










Query Sequence  YMKGGAIPWQRYP. . . FVTMISVERKG
Query Conservation 
  
         ...    
 
    
Alig confidence 












...










Template Conservation 
  
 

  
 
    
   
  


 
Template Sequence  YEPGQGIPAHIDTHSAFEDEIVSLSLG
Template Known Secondary structure 
TT




TTTS
Template Predicted Secondary structure 


















Template SS confidence 


























   229230.........240.........250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions