Job Description P27840 Confidence 100.00% Date Thu Jan 5 11:44:16 GMT 2012 Rank 1 Aligned Residues 185 % Identity 15% Template c3ohgA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein from duf2233 family; PDBTitle: crystal structure of a protein with unknown function from duf22332 family (bacova_00430) from bacteroides ovatus at 1.80 a resolution Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.								.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.																								.
Query SS confidence																																		.	.	.	.	.	.	.																								.
Query Sequence		L	T	V	Q	A	Y	T	V	N	P	Q	T	E	R	V	K	M	Y	W	Q	K	A	N	G	E	A	W	G	T	L	H	A	.	.	.	.	.	.	.	L	L	A	D	I	N	S	Q	G	Q	V	Q	M	A	M	N	G	G	I	Y	D	E	S	.	Y	A	P	L	G	L	Y	I	E	N	G	Q	Q	K	V	A	L
Query Conservation																																		.	.	.	.	.	.	.																								.
Alig confidence																																		.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		Q	H	I	F	V	A	T	I	D	L	N	E	L	T	F	T	P	A	T	K	D	D	K	N	V	P	A	T	G	P	E	S	S	A	P	L	P	I	H	A	F	A	A	E	A	N	G	K	T	V	W	L	G	V	N	G	D	Y	Y	A	D	N	P	R	R	V	X	G	L	F	Y	K	D	G	V	C	I	N	S	Q
Template Known Secondary structure											T	T	T								S	S	S			S				S	G	G	G		B												T	T														T	T	T	T			S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		N	L	A	S	G	E	G	N	F	F	I	R	P	G	G	V	F	Y	V	A	G	D	K	V	G	I	V	R	L	D	A	F	K	T	S	K	E	I	Q	F	A	V	Q	S	G	P	M	L	M	E	N	G	V	I	N	P	R	I	H	.	.	P	N	V	A	S	S	K	I	R	N	G	V	G	I	N	K	H	G	N
Query Conservation																																																													.	.
Alig confidence																							.	.	.	.	.	.																																	.	.
Template Conservation																							.	.	.	.	.	.
Template Sequence		Y	F	E	G	H	D	E	V	L	Y	Q	L	K	N	G	E	T	Y	V	G	Q	.	.	.	.	.	.	A	D	E	A	L	A	H	E	A	N	L	L	H	A	L	G	G	Y	G	L	L	V	K	D	G	V	V	Q	N	F	Y	E	E	X	G	D	L	Q	N	T	H	P	R	T	S	V	G	L	S	Q	D	R	K
Template Known Secondary structure				T	T									T	T	S							.	.	.	.	.	.						T	T	G	G	G								S						T	T							T	T	S	G	G	G	G	S	S	B									T	T	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.							.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		193		.	.	.	.	.	.	200	.										.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.
Predicted Secondary structure			.									.	.	.	.	.	.	.	.	.																													.
Query SS confidence			.									.	.	.	.	.	.	.	.	.																													.
Query Sequence		A	.	V	F	L	L	S	Q	Q	A	.	.	.	.	.	.	.	.	.	T	N	F	Y	D	F	A	C	Y	A	K	A	K	L	N	V	E	Q	L	L	Y	L	D	G	T	I	S	H	.	M	Y	M	K	G
Query Conservation			.									.	.	.	.	.	.	.	.	.																													.
Alig confidence			.									.	.	.	.	.	.	.	.	.												.																	.
Template Conservation																																.
Template Sequence		T	X	Y	V	F	V	V	D	G	R	R	K	D	S	F	F	A	L	G	L	T	L	P	H	L	A	T	X	X	K	.	A	V	G	C	Y	N	A	I	N	L	D	G	G	G	S	T	T	L	I	I	R	K
Template Known Secondary structure											S			S	T	T					B											.			T		S								G	G	G
Template Predicted Secondary structure																																.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions