 |
Job Description | P27840 | Confidence | 34.55% | Date | Thu Jan 5 11:44:16 GMT 2012 |
Rank | 24 | Aligned Residues | 38 |
% Identity | 16% | Template | c3g5jA_ |
PDB info |
PDB header:nucleotide binding protein | Chain: A: PDB Molecule:putative atp/gtp binding protein; |
PDBTitle: crystal structure of n-terminal domain of putative atp/gtp binding2 protein from clostridium difficile 630
|
Resolution | 1.76 Å |
|
  |   |
187 | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | N | K | H | G | N | A | V | F | L | L | S | Q | Q | A | T | N | F | Y | D | F | A | C | Y | A | K | A | K | L | N | V | E | Q | L | L | Y | L | D | G | T |
Query Conservation |   |
|   |   |
|
|   |
|   |
|
|
|
|   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |
|
|   |   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |
|   | . |   |   |
|   | . |   |
|   |   |
|   |
|
|
Template Sequence |   |
A | L | N | Y | D | N | I | V | I | Y | C | A | R | G | G | X | R | S | G | S | I | V | N | L | L | S | . |
S | L | G | V | . |
N | V | Y | Q | L | E | G | G |
Template Known Secondary structure |   |
 | T | T |
| S |  |  |  |  |  |
| S | S | S | S |  |  |  |  |  |  |  |  |  |  |  | . |  | T | T |
| . |
|
|  |  |  | T | T |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
| . |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
. | 110 | . | . | |
. | . | . | . | . | . | . | 120 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|