Job Description P27840 Confidence 26.69% Date Thu Jan 5 11:44:16 GMT 2012 Rank 35 Aligned Residues 62 % Identity 15% Template c2w7vB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:general secretion pathway protein l; PDBTitle: periplasmic domain of epsl from vibrio parahaemolyticus Resolution 2.30 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	L	T	V	Q	A	Y	T	V	N	P	Q	T	E	R	V	K	M	Y	W	Q	K	A	N	G	E	A	W	G	T	L	H	A	L	L	A	D	I	N	S	Q	G	Q	V	Q	M	A	M	N	G	G	I	Y	D	E	S	Y	A	P	L	G	L	Y	I	E	N	G	Q
Query Conservation
Alig confidence																						.	.	.																								.	.	.					.
Template Conservation																						.	.	.																								.	.	.					.
Template Sequence		K	D	L	E	I	T	S	F	K	Y	D	G	Q	R	G	E	V	R	I	H	.	.	.	A	R	S	S	D	F	Q	P	F	E	Q	A	R	V	K	L	A	E	K	F	N	V	E	.	.	.	Q	G	Q	L	.	N	R	S	N	V	V	X	G	S	F	V	L	K	R	Q
Template Known Secondary structure		T	T										T	T	T	T						.	.	.				S	S	S												T	T					.	.	.					.
Template Predicted Secondary structure																						.	.	.																								.	.	.					.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.				.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.				.	.	.	.		.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions