 |
Job Description | P0AG63 | Confidence | 17.07% | Date | Thu Jan 5 11:28:13 GMT 2012 |
Rank | 40 | Aligned Residues | 23 |
% Identity | 30% | Template | d1u0la1 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 2.80 |
|
  |   |
55 | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | D | V | V | E | I | R | E | C | R | P | L | S | K | T | K | S | W | T | L | V | R | V | V | E | K |
Query Conservation |   |
  |
|
|   |
|   |
|   |
|   |
|
|
|
|
|   |
|   |   |   |
|   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |   |   |   |   |   | . | . | . | . |   |   |   |
|   |
|   |   |
|   |
|
|
Template Sequence |   |
V | G | D | R | V | E | Y | T | P | D | E | . |
. |
. |
. |
T | G | S | G | V | I | E | N | V | L | H | R |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |
|
|
| . | . | . | . | S | S | S |  |  |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |
|
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
. | . | . | . | 60 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|