Job Description P0AG63 Confidence 100.00% Date Thu Jan 5 11:28:13 GMT 2012 Rank 1 Aligned Residues 84 % Identity 24% Template c2xznQ_ PDB info PDB header:ribosome Chain: Q: PDB Molecule:ribosomal protein s17 containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		M	T	D	K	I	R	T	L	Q	G	R	V	V	S	D	K	M	E	K	S	I	V	V	A	I	E	R	F	V	K	H	P	I	Y	G	K	F	I	K	R	T	T	K	L	H	V	H	.	D	E	N	N	E	C	G	I	G	D	V	V	E	I	R	E	C	R	P	L	S	K	T	K	S	W	T	L	V	R	V	V
Query Conservation																																																	.
Alig confidence																																																	.
Template Conservation
Template Sequence		L	S	I	R	G	K	I	I	K	G	L	V	I	S	T	K	M	N	R	T	V	I	I	R	R	D	Y	L	H	Y	V	R	K	Y	N	R	Y	E	K	R	H	R	N	I	P	V	H	I	S	P	C	F	S	V	K	E	G	D	I	L	V	A	G	Q	C	R	P	I	S	K	T	V	R	F	N	A	L	Q	V	V
Template Known Secondary structure						S												S	T	T													T	T	T	T															T	T	S				T	T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	A	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	N	E	I	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions