Job Description P0AG63 Confidence 100.00% Date Thu Jan 5 11:28:13 GMT 2012 Rank 6 Aligned Residues 75 % Identity 35% Template c1s1hQ_ PDB info PDB header:ribosome Chain: Q: PDB Molecule:40s ribosomal protein s11; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. Resolution 11.70 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		R	T	L	Q	G	R	V	V	S	D	K	M	E	K	S	I	V	V	A	I	E	R	F	V	K	H	P	I	Y	G	K	F	I	K	R	T	T	K	L	H	V	H	.	D	E	N	N	E	C	G	I	G	D	V	V	E	I	R	E	C	R	P	L	S	K	T	K	S	W	T	L	V	R	V	V	E
Query Conservation																																												.
Alig confidence																																												.
Template Conservation
Template Sequence		K	I	L	T	G	T	V	V	S	T	K	M	H	R	T	I	V	I	R	R	A	Y	L	H	Y	I	P	K	Y	N	R	Y	E	K	R	H	K	N	V	P	V	H	V	S	P	A	F	R	V	Q	V	G	D	I	V	T	V	G	Q	C	R	P	I	S	K	T	V	R	F	N	V	V	K	V	S	A
Template Known Secondary structure													S	S	S													T	T	T															S	S	S	S	S			T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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