Job Description P31057 Confidence 81.19% Date Thu Jan 5 11:46:53 GMT 2012 Rank 268 Aligned Residues 154 % Identity 16% Template d3bofa2 SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 1.70

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		35	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90						.		.	.	.	.	.	.					.	.	100	.	.
Predicted Secondary structure											.																																											.						.	.	.	.	.		.							.	.	.	.
Query SS confidence											.																																											.						.	.	.	.	.		.							.	.	.	.
Query Sequence		D	E	G	L	N	V	M	L	V	.	G	D	S	L	G	M	T	V	Q	G	H	D	S	T	L	P	V	T	V	A	D	I	A	Y	H	T	A	A	V	R	R	G	A	P	N	C	L	L	L	A	D	L	.	P	F	M	A	Y	.	.	.	.	.	A	.	T	P	E	Q	A	F	.	.	.	.	E	N	A	A	T
Query Conservation											.																																											.						.	.	.	.	.		.							.	.	.	.
Alig confidence											.																																											.						.	.	.	.	.		.							.	.	.	.
Template Conservation
Template Sequence		E	S	G	S	D	V	I	L	T	N	T	F	G	A	T	R	M	K	L	R	K	H	G	L	E	D	K	L	D	P	I	V	R	N	A	V	R	I	A	R	R	A	A	G	E	K	L	V	F	G	D	I	G	P	T	G	E	L	P	Y	P	L	G	S	T	L	F	E	E	F	Y	E	N	F	R	E	T	V	E	I
Template Known Secondary structure		T	T	T		S					S		T	T		S					G	G	G	T		G	G	G																	T	T	S										S			B	T	T	T	S	S	B
Template Predicted Secondary structure
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.										.	.
Query SS confidence																					.	.	.										.	.
Query Sequence		V	M	R	A	G	A	N	M	V	K	I	E	G	G	E	W	L	V	E	.	.	.	T	V	Q	M	L	T	E	R	A	.	.	V	P	V	C	G	H	L	G	L	T	P	Q	S	V	N	I	F	G	G	Y	K	V	Q	G	R	G	D	E	A	G	D	Q	L	L	S	D	A	L	A	L	E	A	A	G	A	Q	L
Query Conservation																					.	.	.										.	.
Alig confidence																					.	.	.										.	.						.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		M	V	E	E	G	V	D	G	I	I	F	E	T	F	S	D	I	L	E	L	K	A	A	V	L	A	A	R	E	V	S	R	D	V	F	L	I	A	.	.	.	.	.	.	H	M	T	F	D	E	K	G	R	S	L	T	G	T	D	P	A	N	F	.	.	.	.	.	.	A	I	T	F	D	E	L	D	I	D	A
Template Known Secondary structure					T	T		S																									S	S	S					.	.	.	.	.	.						T	T	S			T	T								.	.	.	.	.	.						T	S	S		S
Template Predicted Secondary structure																																								.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.							.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.							.	.	.	.	.	.	.	.	200	.	.
		178	.	180	.	.	.			.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure								.	.			.	.	.
Query SS confidence								.	.			.	.	.
Query Sequence		L	V	L	E	C	V	.	.	P	V	.	.	.	E	L	A	K	R	I	T	E	A	L	A	I	P	V	I
Query Conservation								.	.			.	.	.
Alig confidence								.	.			.	.	.
Template Conservation
Template Sequence		L	G	I	N	C	S	L	G	P	E	E	I	L	P	I	F	Q	E	L	S	Q	Y	T	D	K	F	L	V
Template Known Secondary structure						S	S	S															T			S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions