Job Description P31057 Confidence 93.37% Date Thu Jan 5 11:46:53 GMT 2012 Rank 114 Aligned Residues 197 % Identity 14% Template d2tpsa_ SCOP info TIM beta/alpha-barrel Thiamin phosphate synthase Thiamin phosphate synthase Resolution 1.25

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																													.	.	.	.	.	.																																													.	.	.
Query SS confidence																													.	.	.	.	.	.																																													.	.	.
Query Sequence		M	K	P	T	T	I	S	L	L	Q	K	Y	K	Q	E	K	K	R	F	A	T	I	T	A	Y	D	Y	.	.	.	.	.	.	S	F	A	K	L	F	A	D	E	G	L	N	V	M	L	V	G	D	S	L	G	M	T	V	Q	G	H	D	S	T	L	P	V	T	V	A	D	I	A	Y	H	T	A	A	.	.	.
Query Conservation																													.	.	.	.	.	.																																													.	.	.
Alig confidence															.	.	.	.											.	.	.	.	.	.															.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation															.	.	.	.																															.	.	.	.	.	.	.	.	.
Template Sequence		M	T	R	I	S	R	E	M	M	K	E	L	L	.	.	.	.	S	V	Y	F	I	M	G	S	N	N	T	K	A	D	P	V	T	V	V	Q	K	A	L	K	G	G	A	T	L	Y	.	.	.	.	.	.	.	.	.	Q	F	R	E	K	G	G	D	A	L	T	G	E	A	R	I	K	F	A	E	K	A	Q	A
Template Known Secondary structure		S	S											T	.	.	.	.	T							G	G	G		S	S													T		S			.	.	.	.	.	.	.	.	.						S	T	T
Template Predicted Secondary structure															.	.	.	.																															.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.										.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	R	G	A	P	N	C	L	L	L	A	D	L	P	F	M	A	Y	A	T	P	E	Q	A	F	E	N	A	A	T	V	M	R	A	G	A	N	M	V	K	I	E	G	G	E	W	L	V	E	T	V	Q	M	L	T	E	R	A	V	P	V	C	G	H	L	G	L	T	P	Q	S	V	N	I	F	G	G	Y	K
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.								.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.								.	.	.	.	.
Template Sequence		A	C	R	E	A	G	V	P	F	I	V	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	E	L	A	L	N	L	K	A	D	G	I	H	I	G	Q	E	D	A	N	A	K	E	V	R	A	A	I	G	D	M	I	.	.	.	.	.	.	.	.	L	G	V	S	A	H	T	.	.	.	.	.
Template Known Secondary structure							T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T		S						T	T	S	S										T	T	S		.	.	.	.	.	.	.	.							S	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.								.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.															.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.									.	.	.	130	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180															.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	G	R	G	D	E	A	G	D	Q	L	L	S	D	A	L	A	L	E	A	A	G	A	Q	L	L	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	C	V	P	V	E	L	A	K	R	I	T	E	A	L	A	I	P	V	I	G	I	G	A	G	N	V	T	D	G	Q	I	L	V	M	H	D
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	M	S	E	V	K	Q	A	E	E	D	G	A	D	Y	V	G	L	G	P	I	Y	P	T	E	T	K	K	D	T	R	A	V	Q	G	V	S	L	I	E	A	V	R	R	Q	G	I	S	I	P	I	V	G	I	G	G	I	T	I	D	N	A	A	P	V	I	Q	A	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.											T		S							S	S				S	S	S	S						T	T									T	T									S	S			T	T	T	S						T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	G	I	T	G	G	H	I	P	K	F	A	K	N	F	L	A	E	T	G	D	I	R	A	A	V	R	Q	Y	M	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	G	V	S	M	I	S	A	I	S	Q	A	E	D	P	E	S	A	A	R	K	F	R	E	E	I	Q	T	Y	K	T
Template Known Secondary structure			S					S					T	S	S
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions