Job Description P31057 Confidence 74.85% Date Thu Jan 5 11:46:53 GMT 2012 Rank 299 Aligned Residues 139 % Identity 19% Template d1xi3a_ SCOP info TIM beta/alpha-barrel Thiamin phosphate synthase Thiamin phosphate synthase Resolution 1.70

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		18	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		R	F	A	T	I	T	A	.	.	.	.	Y	D	Y	S	F	A	K	L	F	A	D	E	G	L	N	V	M	L	V	G	D	S	L	G	M	T	V	Q	G	H	D	S	T	L	P	V	T	V	A	D	I	A	Y	H	T	A	A	V	R	R	G	A	P	N	C	L	L	L	A	D	L	P	F	M	A	Y	A	T	P
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.																				.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	Y	V	I	T	D	R	R	L	K	P	E	V	E	S	V	R	E	A	L	E	G	G	A	T	A	I	Q	M	.	.	.	.	.	.	.	.	.	R	I	K	N	A	P	T	R	E	M	Y	E	I	G	K	T	L	R	Q	L	T	R	E	Y	D	A	L	F	F	V	D	D	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S							T	T	T	S												T	T		S					.	.	.	.	.	.	.	.	.				S																				T	T							S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.										.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	A	F	E	N	A	A	T	V	M	R	A	G	A	N	M	V	K	I	E	G	G	E	W	L	V	E	T	V	Q	M	L	T	E	R	A	V	P	V	C	G	H	L	G	L	T	P	Q	S	V	N	I	F	G	G	Y	K	V	Q	G	R	G	D	E	A	G	D	Q	L	L	S	D	A	L	A	L	E	A	A
Query Conservation
Alig confidence		.	.	.	.	.																																		.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																		.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	R	V	D	V	A	L	A	V	D	A	D	G	V	Q	L	G	P	E	D	M	P	I	E	V	A	K	E	I	A	P	N	L	I	.	.	.	.	.	.	.	.	I	G	A	S	V	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	E	A	L	E	A	E	K	K
Template Known Secondary structure		.	.	.	.	.									T		S						T	T	S											T	T	S		.	.	.	.	.	.	.	.						S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.																																		.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.									.	.	.	.	.	.	.																		110	.	.	.	.	.	.	.	.	.
		174	.	.	.	.	.	180									.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.
Query Sequence		G	A	Q	L	L	V	L	.	.	.	.	.	.	.	.	E	C	V	P	V	E	L	A	K	R	I	T	E	A	L	A	I	P	V	I	G	I	G	A
Query Conservation									.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	D	Y	L	G	A	G	S	V	F	P	T	D	A	R	V	I	G	L	E	G	L	R	K	I	V	E	S	V	K	I	P	V	V	A	I	G	G
Template Known Secondary structure		T		S							S	S																				S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions