Return to main results Retrieve Phyre Job Id

Job DescriptionP31057
Confidence86.86%DateThu Jan 5 11:46:53 GMT 2012
Rank222Aligned Residues136
% Identity8%Templated1wdda1
SCOP infoTIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain
Resolution1.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70.........80.........90. ........100.........110.........120.........130.........140....
Predicted Secondary structure 











.












Query SS confidence 

























.




















































Query Sequence  AYHTAAVRRGAPNCLLLADLPFMAYA. TPEQAFENAATVMRAGANMVKIEGGEWLVETVQMLTERAVPVCGHLGLTPQSV
Query Conservation    
   
 
      



 
 
 
 .    
   
  
  


  




       
  
   



  



 

  
Alig confidence 













.










.




























..





















Template Conservation 
 


  


  

.







  



   
   

 
 



 





  

..  
 



 
  


 

  

Template Sequence  IQVERDKLNKYGRP. LLGCTIKPKLGLSAKNYGRACYECLRGGLDFTDDENVNSQP. . FMRWRDRFVFCAEAIYKSQAET
Template Known Secondary structure  T

SS
.


SSSS


TT
SB


TT
SSBT..TB
Template Predicted Secondary structure 





.



















..


Template SS confidence 















































































   155....160........ .170.........180.........190.........200......... 210.........220.........230.
 
   145....150.........160.........170.........180..... ....190.. .......200.....
Predicted Secondary structure 














.....






Query SS confidence 








































. .






. . .












Query Sequence  NIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVLECVPV. . ELAKRIT. . . EALAIPVIGIGAG
Query Conservation      
  
 


   
   
  
 
  



  
 

 

 ..


  

...  
 

 





Alig confidence 








.






























..






...












Template Conservation 
   

  
.


    

 


  
 
 

   

     
  

  
        


 



 
Template Sequence  GEIKGHYLN. ATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAM
Template Known Secondary structure  SS

B

.


SST
S
T

TT
Template Predicted Secondary structure 


.



















Template SS confidence 

































































   233......240. ........250.........260.........270.........280.........290.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions