Job Description P31057 Confidence 97.05% Date Thu Jan 5 11:46:53 GMT 2012 Rank 32 Aligned Residues 218 % Identity 13% Template d1rd5a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.02

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.		.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.										.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.		.		.	.	.	.																			.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.		.		.	.	.	.																			.	.	.	.	.	.	.	.	.
Query Sequence		S	L	L	Q	K	Y	K	Q	E	K	K	R	F	A	T	I	T	A	.	.	.	Y	.	D	.	.	.	.	Y	S	F	A	K	L	F	A	D	E	G	L	N	V	M	L	V	G	.	.	.	.	.	.	.	.	.	D	S	L	G	M	T	V	Q	G	H	D	S	T	L	P	V	T	V	A	D	I	A	Y	H	T
Query Conservation																				.	.	.		.		.	.	.	.																			.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.		.		.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	M	A	A	L	M	A	K	G	K	T	A	F	I	P	Y	I	T	A	G	D	P	D	L	A	T	T	A	E	A	L	R	L	L	D	G	C	G	A	D	V	I	E	L	G	V	P	C	S	D	P	Y	I	D	G	P	I	I	Q	A	S	V	A	R	A	L	A	S	G	T	T	M	D	A	V	L	E	M	L
Template Known Secondary structure										T	T										T	T	S	S															T	T		S	S								S			T	T	S													T	T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		A	A	V	R	R	G	A	P	N	C	L	L	L	A	D	L	P	F	M	A	Y	A	T	P	E	Q	A	F	E	N	A	A	T	V	M	R	A	G	A	N	M	V	K	I	E	G	.	.	G	E	W	L	V	E	T	V	Q	M	L	T	E	R	A	V	P	V	C	G	H	L	G	L	T	P	Q	S	V	N	I	F
Query Conservation																																																.	.
Alig confidence																.	.	.	.	.						.																						.	.																				.	.									.	.	.
Template Conservation																.	.	.	.	.						.																																											.	.									.	.	.
Template Sequence		R	E	V	T	P	E	L	S	C	P	V	V	L	L	.	.	.	.	.	S	Y	Y	K	P	.	I	M	F	R	S	L	A	K	M	K	E	A	G	V	H	G	L	I	V	P	D	L	P	Y	V	A	A	H	S	L	W	S	E	A	K	N	N	N	L	E	L	V	.	.	L	L	T	T	P	A	I	P	.	.	.
Template Known Secondary structure					G	G	G		S	S						.	.	.	.	.			S			.			S			T						T	T							T	T			T	T	T											T	T					.	.					T	T	S		.	.	.
Template Predicted Secondary structure																.	.	.	.	.						.																																											.	.									.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180														.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query Sequence		G	G	Y	K	V	Q	G	R	G	D	E	A	G	D	Q	L	L	S	D	A	L	A	L	E	A	A	G	A	Q	L	L	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	E	C	V	P	V	E	L	A	K	R	I	T	E	A	L	A	I	P	V	I	G	I	G	A	G	.	N	V	T	D	G	Q	I	L
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	R	M	K	E	I	T	K	A	S	E	G	F	V	Y	L	V	S	V	N	G	V	T	G	P	R	A	N	V	N	P	R	V	E	S	L	I	Q	E	V	K	K	V	T	N	K	P	V	A	V	G	F	G	I	S	K	P	E	H	V	K	Q	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S							S	S			B		T	T	S		B		T														S	S						S				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		V	M	H	D	A	F	G	I	T	G	G	H	I	P	K	F	A	K	N	F	L	A	E	.	.	T	G	D	I	R	A	A	V	R	Q	Y	M	A	E	V	E	S
Query Conservation																									.	.
Alig confidence														.	.										.	.
Template Conservation														.	.
Template Sequence		A	Q	W	G	A	D	G	V	I	I	G	S	.	.	A	M	V	R	Q	L	G	E	A	A	S	P	K	Q	G	L	R	R	L	E	E	Y	A	R	G	M	K	N
Template Known Secondary structure				T	T		S							.	.								S	S	S	S
Template Predicted Secondary structure														.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions