|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | T | I | S | L | L | Q | K | Y | K | Q | E | K | K | R | F | A | T | I | T | A | Y | D | Y | S | F | A | K | L | F | A | D | E | G | L | N | V | M | L | V | G | D | S | L | G | M | T | V | Q | G | H | D | S | T | L | P | V | T | V | A | D | I | A | Y | H | T | A | A | V | R | R | G | A | P | N | C | L | L | L | A |
Query Conservation |   |
  |
|   |   |   |
|
|   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|
|   |   |
|
|   |   |   |   |   |
|
|   |
|   |
|
|
|
|
|
|   |   |   |   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|   |   |
|
|
|
|
|   |   |   |
|   |   |   |
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |
|
|
|
|   |
|
|   |
|   |   |
|
|   |
|
|   |   |   |
|   |
|
|
|
Template Sequence |   |
I | T | V | N | T | L | Q | K | X | K | A | A | G | E | K | I | A | X | L | T | A | Y | E | S | S | F | A | A | L | X | D | D | A | G | V | E | X | L | L | V | G | D | S | L | G | X | A | V | Q | G | R | K | S | T | L | P | V | S | L | R | D | X | C | Y | H | T | E | C | V | A | R | G | A | K | N | A | X | I | V | S |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| T | T |  |  |  |  | T | T |
|
| S | S | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
84 | . | . | . | . | . | 90 | . | |
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | L | P | F | M | A | Y | A | . |
T | P | E | Q | A | F | E | N | A | A | T | V | M | R | A | G | A | N | M | V | K | I | E | G | G | E | W | L | V | E | T | V | Q | M | L | T | E | R | A | V | P | V | C | G | H | L | G | L | T | P | Q | S | V | N | I | F | G | G | Y | K | V | Q | G | R | G | D | E | A | G | D | Q |
Query Conservation |   |
|   |
|   |
|   |
|   | . |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|
|   |   |
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|
|   |   |
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|   |   |
|   |
|   |
|   |   |   |
|   |
|
|   |
|   |
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
Template Sequence |   |
D | L | P | F | G | A | Y | Q | Q | S | K | E | Q | A | F | A | A | A | A | E | L | X | A | A | G | A | H | X | V | K | L | E | G | G | V | W | X | A | E | T | T | E | F | L | Q | X | R | G | I | P | V | C | A | H | I | G | L | T | P | Q | S | V | F | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | A | Q | A |
Template Known Secondary structure |   |
 |
|
| T | T | S | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
| S | G | G | G |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  | S |
| G | G | G | T | T |
| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . |
  |
  |   |
163 | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | S | D | A | L | A | L | E | A | A | G | A | Q | L | L | V | L | E | C | V | P | V | E | L | A | K | R | I | T | E | A | L | A | I | P | V | I | G | I | G | A | G | N | V | T | D | G | Q | I | L | V | M | H | D | A | F | G | I | T | G | G | H | I | P | K | F | A | K | N | F | L | A | E | T | G | D | I | R | A |
Query Conservation |   |
  |
|   |   |
|   |
|   |   |
|
|
|
|   |   |
|   |
|
|   |
|
|   |
|
|
|   |   |
|
|   |   |
|   |
|
|   |
|
|
|
|
|
|   |   |   |
|
|
|
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|
|
|
|   |   |
|
|
|
|   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | L | N | D | A | K | A | H | D | D | A | G | A | A | V | V | L | X | E | C | V | L | A | E | L | A | K | K | V | T | E | T | V | S | C | P | T | I | G | I | G | A | G | A | D | C | D | G | Q | V | L | V | X | H | D | X | L | G | I | F | P | G | K | T | A | K | F | V | K | N | F | X | Q | G | H | D | S | V | Q | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  | S | S |
| S |
| S | S |  |  |  |  |
|  |  |  |  | T | T |
| S | S | S | S |
|
| T | T |
|
|
| S | S | T | T |
| S | S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
  |
  |   |
243 | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | R | Q | Y | M | A | E | V | E | S | G | V | Y | P | G | E | E | H |
Query Conservation |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |
|
|   |   |
|   |
|
|   |   |
|
|
Template Sequence |   |
A | V | R | A | Y | V | A | E | V | K | A | K | T | F | P | A | A | E | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |
| S | S |
| G | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . |
  |