Return to main results Retrieve Phyre Job Id

Job DescriptionP31057
Confidence83.21%DateThu Jan 5 11:46:53 GMT 2012
Rank250Aligned Residues131
% Identity8%Templated1ej7l1
SCOP infoTIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain
Resolution2.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70.........80.........90. ........100.........110...... ...120.........130........
Predicted Secondary structure 











.







......




Query SS confidence 

























.
























. . . . . .





















Query Sequence  AYHTAAVRRGAPNCLLLADLPFMAYA. TPEQAFENAATVMRAGANMVKIEGG. . . . . . EWLVETVQMLTERAVPVCGHLG
Query Conservation    
   
 
      



 
 
 
 .    
   
  
  


  




 ......      
  
   



  


Alig confidence 













.










.
























......





















Template Conservation 
 


  


  

.

 




  



   
   

 
 



 




 
  
   
 
 

 
  


 

  


Template Sequence  IQVERDKLNKYGRP. LLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETG
Template Known Secondary structure  T

SS
.
SSSS


TT
S

TT
SSBTTB
S
Template Predicted Secondary structure 





.
























Template SS confidence 















































































   155....160........ .170.........180.........190.........200.........210.........220.........230...
 
   139140.........150.........160.........170.........180..... ....190.. .......200.....
Predicted Secondary structure 














.....






Query SS confidence 














































. .






. . .












Query Sequence  LTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVLECVPV. . ELAKRIT. . . EALAIPVIGIGAG
Query Conservation 
 

      
  
 


   
   
  
 
  



  
 

 

 ..


  

...  
 

 





Alig confidence 








........





























..






...












Template Conservation     

  

........

   
 
 


  
 
 

   

     
  

  
    
   


 

 
 
Template Sequence  EIKGHYLNA. . . . . . . . TAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAM
Template Known Secondary structure  S


........

SST
S
T

TT
Template Predicted Secondary structure 


........
















Template SS confidence 







































































   234.....240.. .......250.........260.........270.........280.........290.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions