Return to main results Retrieve Phyre Job Id

Job DescriptionP31057
Confidence81.83%DateThu Jan 5 11:46:53 GMT 2012
Rank264Aligned Residues146
% Identity18%Templatec3sz8D_
PDB info PDB header:transferaseChain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  ISLLQKYKQEKKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADL
Query Conservation     

     
  
   



  

     

 
 





     

  

  

  

  
   
 
      



 
Alig confidence 






























.












...............








.



.

..
Template Conservation 
  
 
     

   

  
   

 
   .

  



    
...............  

  

 . 


.

..
Template Sequence  LKIFAEVKARFGVPVITDVHEAEQAAPVAEI. ADVLQVPAFLARQ. . . . . . . . . . . . . . . TDLVVAIAK. AGKP. VN. . V
Template Known Secondary structure 




SGGG.
S
GGGTT
................T
S
...
Template Predicted Secondary structure 





.








...............
.



...
Template SS confidence 















































































   76...80.........90.........100...... ...110......... 120........ .130.. .. .
 
   86...90.........100......... 110.........120.........130.........140.........150.........160....
Predicted Secondary structure 










.














Query SS confidence 























.






















































Query Sequence  PFMAYATPEQAFENAATVMRAGAN. MVKIEGGEWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLL
Query Conservation 
 
 
     
   
  
  


 . 




       
  
   



  



 

      
  
 


   
   
Alig confidence 























.

























.........
















.

Template Conservation 
 

  
  
   


 
   

  
 

 


 

      

  
  
 .........      

  
 

  
.  
Template Sequence  KKPQFMSPTQLKHVVSKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMA. . . . . . . . . ETTGGCPVIFDVTHSLQ. VL
Template Known Secondary structure 

TTS
TTSTT





SSS


TT.........TTTS

TTTT

.
Template Predicted Secondary structure 




















.........










.
Template SS confidence 















































































   136...140.........150.........160.........170.........180...... ...190.........200... ..
 
   165....170.........180.
Predicted Secondary structure 




Query SS confidence 
















Query Sequence  SDALALEAAGAQLLVLE
Query Conservation    
 
  



  
 

Alig confidence 
















Template Conservation      



 

 
  

Template Sequence  DLARAGIAVGIAGLFLE
Template Known Secondary structure 

S
Template Predicted Secondary structure 


Template SS confidence 
















   221........230.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions