 |
Job Description | P31057 | Confidence | 95.07% | Date | Thu Jan 5 11:46:53 GMT 2012 |
Rank | 74 | Aligned Residues | 95 |
% Identity | 18% | Template | c3q58A_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:n-acetylmannosamine-6-phosphate 2-epimerase; |
PDBTitle: structure of n-acetylmannosamine-6-phosphate epimerase from salmonella2 enterica
|
Resolution | 1.80 Å |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | T | T | I | S | L | L | Q | K | Y | K | Q | E | K | K | R | F | A | T | I | T | A | Y | D | Y | S | F | A | K | L | F | A | D | E | G | L | N | V | M | L | V | G | D | S | L | G | M | T | V | Q | G | H | D | S | T | L | P | V | T | V | A | D | I | A | Y | H | T | A | A | V | R | R | G | A | P | N | C | L | L | L |
Query Conservation |   |
  |   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|
|   |   |
|
|   |   |   |   |   |
|
|   |
|   |
|
|
|
|
|
|   |   |   |   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |
|   | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   | . |   |   |
|
| . |
|
|
Template Sequence |   |
P | V | D | I | D | S | L | L | T | R | I | R | L | H | G | L | L | A | X | A | D | C | S | T | V | N | E | G | I | S | C | H | Q | K | G | I | E | F | I | G | T | T | . |
. |
. |
. |
. |
. |
. |
L | S | G | Y | T | G | P | I | T | P | V | E | P | D | L | A | X | V | T | Q | L | S | H | . |
A | G | C | R | . |
V | I |
Template Known Secondary structure |   |
S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |
| T | . | . | . | . | . | . | . | T | T | T | S | S | S | S |
|
|
| S | S |
|
|  |  |  |  |  |  |  |  | T | . | T | T |
|
| . |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| . |
|
|
|  | . |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
. | . | . | 180 | |
. | . |
  |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | L | P | F | M | A | Y | A | T | P | E | Q | A | F | E | N | A | A | T | V | M | R | A | G | A | N | M | V | K | I |
Query Conservation |   |
|
|   |
|   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|
|   |   |
|
|
|
Alig confidence |   |
| . | . |
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
| . | . |   |
|
| . |
|   |
|   |
|
|
|   |   | . | . | . | . |   |   |   |   |
|
|
|
|
|
|
|
Template Sequence |   |
A | . |
. |
E | G | R | . |
Y | N | T | P | A | L | A | A | N | . |
. |
. |
. |
A | I | E | H | G | A | W | A | V | T | V |
Template Known Secondary structure |   |
 | . | . |  | S | S | . |
|
| S |  |  |  |  |  |  | . | . | . | . |  |  |  | T | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 | . | . |  |
|
| . |
|
|
|  |  |  |  |  |  | . | . | . | . |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
183 | |
|
. | . | . | |
. | . | . | 190 | . | . | . | . | . | |
|
|
|
. | . | . | . | 200 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|