 |
Job Description | P31057 | Confidence | 93.66% | Date | Thu Jan 5 11:46:53 GMT 2012 |
Rank | 104 | Aligned Residues | 49 |
% Identity | 29% | Template | c3ojcD_ |
PDB info |
PDB header:isomerase | Chain: D: PDB Molecule:putative aspartate/glutamate racemase; |
PDBTitle: crystal structure of a putative asp/glu racemase from yersinia pestis
|
Resolution | 1.75 Å |
|
  |   |
154 | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | |
. | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | R | G | D | E | A | G | D | Q | L | L | S | D | A | L | A | L | E | A | A | G | A | Q | L | L | V | L | E | C | . |
V | P | V | E | L | A | K | R | I | T | E | A | L | A | I | P | V | I | G | I |
Query Conservation |   |
|
|
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |
|
|
|
|   |   |
|   |
|
|   | . |
|
|   |
|
|
|   |   |
|
|   |   |
|   |
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |
|
Template Sequence |   |
G | D | W | Q | T | A | A | Q | L | L | S | N | A | A | I | S | L | K | H | A | G | A | E | V | I | V | V | C | T | N | T | X | H | K | V | A | D | D | I | E | A | A | C | G | L | P | L | L | H | I |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  | S | S | S | G | G | G | G | G |  |  |  |  |  |  |  |  | T | S |
| B |
|
|  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|