Job Description P31057 Confidence 85.73% Date Thu Jan 5 11:46:53 GMT 2012 Rank 230 Aligned Residues 152 % Identity 22% Template c3ngjC_ PDB info PDB header:lyase Chain: C: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of a putative deoxyribose-phosphate aldolase from2 entamoeba histolytica Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.												.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	P	T	T	I	S	L	L	Q	K	Y	K	Q	E	K	K	R	F	A	T	I	T	A	Y	D	Y	S	.	.	.	.	.	.	.	.	.	.	.	F	A	K	L	F	A	D	E	G	L	N	V	M	L	V	G	D	S	L	G	M	T	V	Q	G	H	D	S	T	L	P	V	T	V	A	D	I	A	Y	H	T
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.															.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation															.																																																				.	.	.	.	.	.	.
Template Sequence		V	N	P	T	W	V	P	L	C	A	E	L	L	.	K	G	T	G	V	K	V	C	T	V	I	G	F	P	L	G	A	T	P	S	E	V	K	A	Y	E	T	K	V	A	V	E	Q	G	A	E	E	V	D	M	V	I	N	I	G	M	V	K	A	K	K	.	.	.	.	.	.	.	Y	D	D	V	E	K	D	V
Template Known Secondary structure				G	G	G								T	.	T	T	S	S								S	T	T	T			S															T	T		S													T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure															.																																																				.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.								.	.	.	.	.	110	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	V	R	R	G	A	P	N	C	L	L	L	A	D	L	P	F	M	A	Y	A	T	P	E	Q	A	F	E	N	A	A	T	V	M	R	A	G	A	N	M	V	K	I	E	G	G	E	W	L	V	E	T	V	Q	M	L	T	E	R	A	V	P	V	C	G	H	L	G	L	T	P	Q	S	V	N	I	F	G	G
Query Conservation
Alig confidence																					.																														.	.	.	.	.	.	.	.	.	.
Template Conservation																					.																														.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	V	V	D	A	S	G	K	A	L	T	K	V	I	I	E	C	C	.	Y	L	T	N	E	E	K	V	E	V	C	K	R	C	V	A	A	G	A	E	Y	V	K	T	S	T	G	F	G	.	.	.	.	.	.	.	.	.	.	T	H	G	A	T	P	E	D	V	K	L	M	K	D	T	V	G	D	K	A	L
Template Known Secondary structure									T	T	S								G	G	.	G	S																T		S							S	S	S	.	.	.	.	.	.	.	.	.	.	S																T	T	S	S
Template Predicted Secondary structure																					.																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160											.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		Y	K	V	Q	G	.	.	R	G	D	E	A	G	D	Q	L	L	S	D	A	L	A	L	E	A	A	G	A	Q	L	L
Query Conservation							.	.
Alig confidence							.	.			.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.
Template Sequence		V	K	A	A	G	G	I	R	T	.	.	.	.	.	.	.	F	D	D	A	M	K	M	I	N	N	G	A	S	R	I
Template Known Secondary structure						S	S			S	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions