Job Description P31057 Confidence 95.70% Date Thu Jan 5 11:46:53 GMT 2012
Rank 61 Aligned Residues 94
% Identity 20% Template c3n2xB_
PDB info
PDB header: lyaseChain: B: PDB Molecule: uncharacterized protein yage;
PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate
Resolution 2.20 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
92 . . . . . . . 100 . . . . . . . . . 110 . . . . . .
. . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . . . . . 160 . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
T P E Q A F E N A A T V M R A G A N M V K I E G G .
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E W L V E T V Q M L T E R A V P V C G H L G L T P Q S V N I F G G Y K V Q G R G D E A G D Q
Query Conservation  
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Template Conservation  
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Template Sequence  
D K P G T A A L I D D L I K A G V D G L F F L G S G G E F S Q L G A E E R K A I A R F A I D H V .
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D R R V P V L I G T G G T N A R E
Template Known Secondary structure  
T T S S S T T T T G G G S . . . . . . . . . . . . . . . T T S S S S
Template Predicted Secondary structure  
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Template SS confidence  
   
32 . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . .
80 . . . . . . . . . 90 . . . . . .
 
   
163 . . . . . . 170 . . . . . . . . . 180 . .
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190 . . . . . . . . . 200
Predicted Secondary structure  
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Query Sequence  
L L S D A L A L E A A G A Q L L V L E C .
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V P V E L A K .
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R I T E A L A I P V I
Query Conservation  
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Alig confidence  
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Template Conservation  
                                                                 
Template Sequence  
T I E L S Q H A Q Q A G A D G I V V I N P Y Y W K V S E A N L I R Y F E Q V A D S V T L P V M
Template Known Secondary structure  
T S S S S T S S
Template Predicted Secondary structure  
Template SS confidence  
   
97 . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]