Job Description P31057 Confidence 88.28% Date Thu Jan 5 11:46:53 GMT 2012 Rank 207 Aligned Residues 144 % Identity 18% Template c3ktsA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein; PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365 Resolution 2.75 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	I	T	A	Y	D	Y	S	F	A	K	L	F	A	D	E	G	L	N	V	M	L	V	G	D	S	L	G	M	T	V	Q	G	H	D	S	T	L	P	V	T	V	A	D	I	A	Y	H	T	A	A	V	R	R	G	A	P	N	C	L	L	L	A	D	L	P	F	M	A	Y	A	T	P	E	Q	A	F	E	N
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Sequence		I	I	P	A	A	H	N	Q	K	D	M	E	K	I	L	E	L	D	L	T	Y	M	V	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	T	H	V	A	Q	L	K	A	L	V	K	Y	A	Q	A	G	G	K	K	V	L	L	H	A	D	L	V	N	G	.	L	K	N	D	D	Y	A	I	D	F
Template Known Secondary structure							S	S	S							T	T	S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.		S			T	T	T											T	T							G	G	G			T	.				S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.															.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.
		100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		A	A	T	V	M	R	.	A	G	A	N	M	V	K	I	E	G	G	E	W	L	V	E	T	V	Q	M	L	T	E	R	A	V	P	V	C	G	H	L	G	L	T	P	Q	S	V	N	I	F	G	G	Y	K	V	Q	G	R	G	D	E	A	G	D	Q	L	L	S	D	A	L	A	L	E	A	A	G	A	Q	L	L
Query Conservation								.
Alig confidence		.	.	.				.								.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation		.	.	.												.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Sequence		.	.	.	L	C	T	E	I	C	P	D	G	I	I	.	.	.	.	S	T	R	G	N	A	I	M	K	A	K	Q	H	K	M	L	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	L	F	M	I	D	S	S	A	Y	N	K	G	V	.	.	.	A	L	I	Q	K	V	Q	P	D	C	I
Template Known Secondary structure		.	.	.				T	T			S				.	.	.	.		S											T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S									.	.	.									S
Template Predicted Secondary structure		.	.	.												.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template SS confidence
					75	.	.	.	.	80	.	.	.	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.
			179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	V	L	E	C	V	P	V	E	L	A	K	R	I	T	E	A	L	A	I	P	V	I	G	I	G
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		E	L	L	P	G	I	I	P	E	Q	V	Q	K	M	T	Q	K	L	H	I	P	V	I	A	G	G
Template Known Secondary structure						T	T																				S
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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