Job Description P31057 Confidence 89.46% Date Thu Jan 5 11:46:53 GMT 2012 Rank 190 Aligned Residues 134 % Identity 18% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	L	F	A	D	E	G	L	N	V	M	L	V	G	D	S	L	G	M	T	V	Q	G	H	D	S	T	L	P	V	T	V	A	D	I	A	Y	H	T	A	A	V	R	R	G	A	P	N	C	L	L	L	A	D	L	P	F	M	A	Y	A	T	P	E	Q	A	F	E	N	A	A	T	V	M	R	A	G	A	N
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Template Sequence		A	K	A	L	D	N	F	G	V	D	Y	I	E	L	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	A	S	E	Q	S	R	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	.	.	.	.	.	.	.	.	M	D	D	A	R	V	A	V	E	T	G	V	D
Template Known Secondary structure									T		S							.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G													T	S			S	S								S		.	.	.	.	.	.	.	.										T	T		S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.														.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.	.	120
		110	.	.	.	.	.	.	.	.																	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	V	K	I	E	G	G	E	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	E	T	V	Q	M	L	T	E	R	A	V	P	V	C	G	H	L	G	L	T	P	Q	S	V	N	I	F	G	G	Y	K	V	Q	G	R	G	D	E	A	G	D	Q	L	L	S	D	A	L	A	L	E	A	A
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	D	V	V	I	G	T	S	Q	Y	L	R	K	Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I
Template Known Secondary structure									G	G	G																										T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	G	G	G	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		174	.	.	.	.	.	180						.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.						.	.	.
Query SS confidence									.	.	.	.	.						.	.	.
Query Sequence		G	A	Q	L	L	V	L	.	.	.	.	.	E	C	V	P	V	.	.	.	E	L	A	K	R	I	T	E	A	L	A	I	P	V
Query Conservation									.	.	.	.	.						.	.	.
Alig confidence									.	.	.	.	.						.	.	.
Template Conservation
Template Sequence		G	V	N	R	V	G	I	A	D	T	V	G	C	A	T	P	R	Q	V	Y	D	L	I	R	T	L	R	G	V	V	S	C	D	I
Template Known Secondary structure				S							S	S	S																			S	S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions