Job Description P31057 Confidence 94.02% Date Thu Jan 5 11:46:53 GMT 2012 Rank 95 Aligned Residues 101 % Identity 23% Template c3fluD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from the pathogen2 neisseria meningitidis Resolution 2.00 Å

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		85	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.										.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure									.	.																										.	.	.	.	.	.	.	.	.
Query SS confidence									.	.																										.	.	.	.	.	.	.	.	.
Query Sequence		L	P	F	M	A	Y	A	.	.	T	P	E	Q	A	F	E	N	A	A	T	V	M	R	A	G	A	N	M	V	K	I	E	G	G	.	.	.	.	.	.	.	.	.	E	W	L	V	E	T	V	Q	M	L	T	E	R	A	V	P	V	C	G	H	L	G	L	T	P	Q	S	V	N	I	F	G	G	Y	K	V	Q
Query Conservation									.	.																										.	.	.	.	.	.	.	.	.
Alig confidence									.	.																										.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	M	N	Q	D	G	S	I	H	Y	E	Q	L	R	D	L	I	D	W	H	I	E	N	G	T	D	G	I	V	A	V	G	T	T	G	E	S	A	T	L	S	V	E	E	H	T	A	V	I	E	A	V	V	K	H	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	R	V	P	V	I	A
Template Known Secondary structure				B		T	T	S		B															T	T							S	S	T	T	T	T	G	G	G	S																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																.	.	70	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.							.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																															.	.	.	.	.	.									.	.	.
Query SS confidence																															.	.	.	.	.	.									.	.	.
Query Sequence		G	R	G	D	E	A	G	D	Q	L	L	S	D	A	L	A	L	E	A	A	G	A	Q	L	L	V	L	E	C	.	.	.	.	.	.	V	P	V	E	L	A	K	R	.	.	.	I	T	E	A	L	A	I	P	V	I
Query Conservation																															.	.	.	.	.	.									.	.	.
Alig confidence																															.	.	.	.	.	.									.	.	.
Template Conservation
Template Sequence		G	T	G	A	N	N	T	V	E	A	I	A	L	S	Q	A	A	E	K	A	G	A	D	Y	T	L	S	V	V	P	Y	Y	N	K	P	S	Q	E	G	I	Y	Q	H	F	K	T	I	A	E	A	T	S	I	P	M	I
Template Known Secondary structure						S	S															T		S									S	S																	T			S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions