Job Description P31057 Confidence 100.00% Date Thu Jan 5 11:46:53 GMT 2012 Rank 14 Aligned Residues 237 % Identity 20% Template c3fa4D_ PDB info PDB header:lyase Chain: D: PDB Molecule:2,3-dimethylmalate lyase; PDBTitle: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate2 lyase superfamily member, triclinic crystal form Resolution 2.18 Å

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		7	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure							.																																	.
Query SS confidence							.																																	.
Query Sequence		S	L	L	Q	K	.	Y	K	Q	E	K	K	R	F	A	T	I	T	A	Y	D	Y	S	F	A	K	L	F	A	D	E	G	L	N	V	M	L	V	.	G	D	S	L	G	M	T	V	Q	G	H	D	S	T	L	P	V	T	V	A	D	I	A	Y	H	T	A	A	V	R	R	G	A	P	N	C	L	L	L	A	D
Query Conservation							.																																	.
Alig confidence							.																																	.
Template Conservation
Template Sequence		T	S	L	R	R	A	L	E	N	P	D	S	F	I	V	A	P	G	V	Y	D	G	L	S	A	R	V	A	L	S	A	G	F	D	A	L	Y	M	T	G	A	G	T	A	A	S	V	H	G	Q	A	D	L	G	I	C	T	L	N	D	M	R	A	N	A	E	M	I	S	N	I	S	P	S	T	P	V	I	A	D
Template Known Secondary structure										S	T	T										S									T	T	T		S														T	S	S		S	S	S																		S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		L	P	F	M	A	Y	A	T	P	E	Q	A	F	E	N	A	A	T	V	M	R	A	G	A	N	M	V	K	I	E	G	G	E	W	L	V	E	T	V	Q	M	L	T	E	R	A	V	P	V	C	G	H	L	G	L	T	P	Q	S	V	N	I	.	.	.	.	F	G	G	Y	K	V	Q	G	R	G	D	E	A	G
Query Conservation																																																																.	.	.	.
Alig confidence						.																																.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation						.																																.	.	.	.	.	.	.	.
Template Sequence		A	D	T	G	.	Y	G	G	P	I	M	V	A	R	T	T	E	Q	Y	S	R	S	G	V	A	A	F	H	I	E	D	Q	V	Q	T	K	.	.	.	.	.	.	.	.	I	L	V	D	T	D	T	Y	V	T	R	I	R	A	A	V	Q	A	R	Q	R	I	G	S	D	I	V	V	I	A	R	T	D	S	L	Q
Template Known Secondary structure			T	T		.	S	S	S														T	T									B					.	.	.	.	.	.	.	.		B																					T
Template Predicted Secondary structure						.																																.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.									.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
						161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure		.	.	.	.																										.																																		.	.
Query SS confidence		.	.	.	.																										.																																		.	.
Query Sequence		.	.	.	.	D	Q	L	L	S	D	A	L	A	L	E	A	A	G	A	Q	L	L	V	L	E	C	V	P	V	.	E	L	A	K	R	I	T	E	A	L	A	I	P	V	I	G	I	G	A	G	N	V	T	D	G	Q	I	L	V	M	H	D	A	.	.	F	G	I	T	G	G	H	I	P	K	F	A	K	N	F
Query Conservation		.	.	.	.																										.																																		.	.
Alig confidence		.	.	.	.																										.																																		.	.										.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		T	H	G	Y	E	E	S	V	A	R	L	R	A	A	R	D	A	G	A	D	V	G	F	L	E	G	I	T	S	R	E	M	A	R	Q	V	I	Q	D	L	A	G	W	P	L	L	L	N	M	V	E	H	G	A	T	P	S	I	S	A	A	E	A	K	E	M	G	F	R	I	I	I	F	P	.	.	.	.	.	.
Template Known Secondary structure																			T		S					T	T														T	T	T	S		B						T	T	S	S	S												T		S					T	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	T	G	D	I	R	A	A	V	R	Q	Y	M	A	E	V	E	S	G	V	Y	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	A	L	G	P	A	V	A	A	M	R	E	A	M	E	K	L	K	R	D	G	I	P	G
Template Known Secondary structure		T	T	T																			S	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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