Job Description P31057 Confidence 99.95% Date Thu Jan 5 11:46:53 GMT 2012 Rank 18 Aligned Residues 232 % Identity 20% Template c3e5bB_ PDB info PDB header:lyase Chain: B: PDB Molecule:isocitrate lyase; PDBTitle: 2.4 a crystal structure of isocitrate lyase from brucella2 melitensis Resolution 2.37 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.																								.	.	.	.
Query SS confidence																																																		.	.	.	.	.																								.	.	.	.
Query Sequence		S	L	L	Q	K	Y	K	Q	E	K	K	R	F	A	T	I	T	A	Y	D	Y	S	F	A	K	L	F	A	D	E	G	L	N	V	M	L	V	G	D	S	L	G	M	T	V	Q	G	H	.	.	.	.	.	D	S	T	L	P	V	T	V	A	D	I	A	Y	H	T	A	A	V	R	R	G	A	P	.	.	.	.
Query Conservation																																																		.	.	.	.	.																								.	.	.	.
Alig confidence																																																		.	.	.	.	.																								.	.	.	.
Template Conservation
Template Sequence		N	R	L	W	K	L	I	H	E	E	D	F	V	N	A	L	G	A	L	S	G	N	Q	A	M	Q	M	V	R	A	G	L	K	A	I	Y	L	S	G	W	Q	V	A	A	D	A	N	T	A	S	A	M	Y	P	D	Q	S	L	Y	P	A	N	A	G	P	E	L	A	K	R	I	N	R	T	L	Q	R	A	D	Q
Template Known Secondary structure											S	S						B		S	S										T	T		S															T	T		S				S	S	S		S		T	T
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
																	78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	C	L	L	L	A	D	L	P	F	M	A	Y	A	T	P	E	Q	A	F	E	N	A	A	T	V	M	R	A	G	A	N	M	V	K	I	E	G	G	E	W	L	V	E	T	V	Q	M	L	T	E	R	A	V	P	V	C	G	H	L	G	L	T	P	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.									.																															.	.	.	.	.	.	.
Template Conservation																			.									.																															.	.	.	.	.	.	.
Template Sequence		I	E	T	A	E	G	K	G	L	S	V	D	T	W	F	A	P	.	I	V	A	D	A	E	A	G	.	F	G	G	P	L	D	A	F	E	I	M	K	A	Y	I	E	A	G	A	A	G	V	H	F	E	D	Q	L	A	S	.	.	.	.	.	.	.	G	K	V	L	I	P	T	A	A	H	I	R	N	L	N	A
Template Known Secondary structure							T	S			S	S	S		S				.						T	T	T	.	T	S	S															T		S						S	B				.	.	.	.	.	.	.
Template Predicted Secondary structure																			.									.																															.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.								.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		143	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.																																			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.
Predicted Secondary structure							.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence							.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		S	V	N	I	F	.	.	.	.	G	G	Y	K	V	Q	G	R	G	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	D	Q	L	L	S	D	A	L	A	L	E	A	A	G	A	Q	L	L	V	L	E	C	.	V
Query Conservation							.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence							.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.									.
Template Conservation																																																																							.
Template Sequence		A	R	L	A	A	D	V	M	G	T	P	T	L	I	V	A	R	T	D	A	E	A	A	K	L	L	T	S	D	I	D	E	R	D	Q	P	F	V	D	Y	E	A	G	R	T	A	E	G	F	Y	Q	V	K	N	G	I	E	P	C	I	A	R	A	I	A	Y	A	P	Y	.	C	D	L	I	W	M	E	T	S	K
Template Known Secondary structure										T											T	T	T					S				S	T	T	T	G	G	G	B		T	T	S		B		T	T	S				B			S												G	G	G	.		S							S	S
Template Predicted Secondary structure																																																																							.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.
		184	.		.	.	.	.	190	.	.	.	.	.						.	.	.	.	200	.	.	.	.	.	.							.	.	.	210	.	.	.	.	.				.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure				.											.	.	.	.	.												.	.	.	.	.	.										.	.	.
Query SS confidence				.											.	.	.	.	.												.	.	.	.	.	.										.	.	.
Query Sequence		P	V	.	E	L	A	K	R	I	T	E	A	L	.	.	.	.	.	A	I	P	V	I	G	I	G	A	G	N	.	.	.	.	.	.	V	T	D	G	Q	I	L	V	M	.	.	.	H	D	A	F	G	I	T	G	G	H	I	P	K	F	A	K	N	F	L	A	E	T	G	D	I	R	A	A	V	R	Q	Y	M
Query Conservation				.											.	.	.	.	.												.	.	.	.	.	.										.	.	.
Alig confidence				.											.	.	.	.	.												.	.	.	.	.	.										.	.	.													.	.
Template Conservation																																																													.	.
Template Sequence		P	D	L	A	Q	A	R	R	F	A	E	A	V	H	K	A	H	P	G	K	L	L	A	Y	N	C	S	P	S	F	N	W	K	K	N	L	D	D	A	T	I	A	K	F	Q	R	E	L	G	A	M	G	Y	K	F	Q	F	I	T	.	.	L	A	G	F	H	Q	L	N	Y	G	M	F	E	L	A	R	G	Y	K
Template Known Secondary structure																		S	T	T									S	S	S						S															T	T							T	.	.	T
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.			.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		249	250
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		363	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions