Return to main results Retrieve Phyre Job Id

Job DescriptionP31057
Confidence72.14%DateThu Jan 5 11:46:53 GMT 2012
Rank310Aligned Residues96
% Identity8%Templatec3d0cB_
PDB info PDB header:lyaseChain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 oceanobacillus iheyensis at 1.9 a resolution
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20...... ...30.........40.........50.........60.........70.........80.
Predicted Secondary structure 






....




















Query SS confidence 




















. . . .






















































Query Sequence  ISLLQKYKQEKKRFATITAYD. . . . YSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLL
Query Conservation     

     
  
   



....  

     

 
 





     

  

  

  

  
   
 
      
Alig confidence 




















....

















.........



























Template Conservation               

     

  

  
  
   


 


 .........

 
   
   
      

     

 
Template Sequence  ATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVXIH. . . . . . . . . QPVHPYITDAGAVEYYRNIIEALDAPSI
Template Known Secondary structure  TTSS
SSTT
S
.........



S


SSS
Template Predicted Secondary structure 











.........











Template SS confidence 















































































   6970.........80.........90.........100.........110. ........120.........130.........
 
   82.......90.........100..... ....110......
Predicted Secondary structure 







.






Query SS confidence 























.










Query Sequence  LADLPFMAYATPEQAFENAATVMR. AGANMVKIEGG
Query Conservation 


 
 
 
     
   
  
  .


  




 
Alig confidence 








......








.










Template Conservation 


 
    ......      
   
 




    
Template Sequence  IYFKDAHLS. . . . . . DDVIKELAPLDKLVGIKYAIN
Template Known Secondary structure 

TTS
......TTT
TT


Template Predicted Secondary structure 





......









Template SS confidence 



































   140........ .150.........160.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions