Job Description P31057 Confidence 36.81% Date Thu Jan 5 11:46:53 GMT 2012 Rank 434 Aligned Residues 141 % Identity 13% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		F	A	K	L	F	A	D	E	G	L	N	V	M	L	V	G	D	S	L	G	M	T	V	Q	G	H	D	S	T	L	P	.	V	T	V	A	D	I	A	Y	H	T	A	A	V	R	R	G	A	P	N	C	L	L	L	A	D	L	P	F	M	A	Y	A	T	P	E	Q	A	F	E	N	A	A	T	V	M	R	A	G
Query Conservation																																	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.																					.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		F	A	I	T	F	D	E	L	D	I	D	A	L	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	C	S	L	G	P	E	E	I	L	P	I	F	Q	E	L	S	Q	Y	T	D	K	F	.	L	V	V	E	P	N	A	G	Y	P	L	K	P	H	D	F	A	V	H	I	D	S	Y	Y	E	L	G
Template Known Secondary structure								T	S	S		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S														T	T			S		.																		T	T						T	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.															.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	N	M	V	K	I	E	G	G	E	W	L	V	E	T	V	Q	M	L	T	E	R	A	V	P	V	C	G	H	L	G	L	T	P	Q	S	V	N	I	F	G	G	Y	K	V	Q	G	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.								.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	N	I	F	G	.	.	G	C	C	G	T	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	V	K	L	F	R	K	V	L	G	N	R	K	P	L	Q	R	K	K	K	R	I	F	A	V	S	S	P	S	K	L	V	T	F	D	H	F	V	V	I	G	E	R	I	N	P	A	G	R	K	K	L
Template Known Secondary structure			S				.	.			T	T				.	.	.	.	.	.	.	.	.	.	.	.	.												S																	S	S					S	S	S											T	T
Template Predicted Secondary structure							.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270			.	.	.	.	.	.	.														.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
							157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.									.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																											.			.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																											.			.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	D	E	A	G	D	Q	L	L	S	D	A	L	A	L	E	A	A	G	A	Q	L	L	V	L	E	C	.	V	P	.	.	.	.	.	.	.	.	V	E	L	A	K	R	I	T	E	A	L	A	I	P	V
Query Conservation		.	.	.	.	.																											.			.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																											.			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	A	E	M	Q	K	G	N	E	E	I	V	I	K	E	A	K	T	Q	V	E	K	G	A	E	V	L	D	V	N	F	G	I	E	S	Q	I	D	V	R	Y	V	E	K	I	V	Q	T	L	P	Y	V	S	N	V	P	L
Template Known Secondary structure							T	T															T	T		S							S	S	G	G	G	S																T		S
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions