Job Description P31057 Confidence 38.30% Date Thu Jan 5 11:46:53 GMT 2012 Rank 429 Aligned Residues 138 % Identity 14% Template c2zrvC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:isopentenyl-diphosphate delta-isomerase; PDBTitle: crystal structure of sulfolobus shibatae isopentenyl2 diphosphate isomerase in complex with reduced fmn. Resolution 2.30 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		S	F	A	K	L	F	A	D	E	G	L	N	V	M	.	L	V	G	D	S	L	G	M	T	V	Q	G	H	D	S	T	L	P	V	T	V	A	D	I	A	Y	H	T	A	A	V	R	R	G	A	P	N	C	L	L	L	A	D	L	P	F	M	A	Y	A	T	P	E	Q	A	F	E	N	A	A	T	V	M	R	A
Query Conservation																.
Alig confidence																.																						.	.																										.	.					.	.	.	.
Template Conservation																																						.	.																										.	.					.	.	.	.
Template Sequence		E	F	Q	D	A	I	Q	M	I	E	A	D	A	I	A	V	H	L	N	P	A	Q	E	V	F	Q	P	E	G	E	P	E	Y	Q	I	Y	.	.	A	L	E	K	L	R	D	I	S	K	E	L	S	V	P	I	I	V	K	E	S	G	N	G	I	.	.	S	M	E	T	.	.	.	.	A	K	L	L	Y	S	Y
Template Known Secondary structure										T	T		S														S	S	S							T		.	.													S	S							S	S	S			.	.					.	.	.	.							T
Template Predicted Secondary structure																																						.	.																										.	.					.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.					.	.	.	.	.	.	210
		107	.	.	110	.	.	.	.	.	.	.	.																		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Query Sequence		G	A	N	M	V	K	I	E	G	G	E	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	E	T	V	Q	M	L	T	E	R	A	V	P	V	C	G	H	L	G	L	T	P	Q	S	V	N	I	F	G	G	Y	K	V	Q	G	.	R	G	D	E	A	G	D	Q	L	L	S	D	A	L
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.												.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		G	I	K	N	F	D	T	S	G	Q	G	G	T	N	W	I	A	I	E	M	I	R	D	I	R	R	G	N	W	K	A	E	S	A	K	N	F	L	D	W	G	V	P	T	A	A	S	I	M	E	V	R	Y	S	V	P	D	S	F	L	V	G	S	G	G	I	R	S	G	L	D	A	A	K	A	I	A	.	.	.
Template Known Secondary structure		T									B	T	S	B													T	T		T								T	T	T		S		B												S	T	T							S	S			S										.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E	A	A	G	A	Q	L	L	V	L
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	L	G	A	D	I	A	G	M
Template Known Secondary structure		.	.	.	.		T		S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						288	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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