Job Description P31057 Confidence 94.99% Date Thu Jan 5 11:46:53 GMT 2012 Rank 77 Aligned Residues 107 % Identity 13% Template c2v9dB_ PDB info PDB header:lyase Chain: B: PDB Molecule:yage; PDBTitle: crystal structure of yage, a prophage protein belonging to2 the dihydrodipicolinic acid synthase family from e. coli3 k12 Resolution 2.15 Å

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		86	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure								.	.																																																											.	.
Query SS confidence								.	.																																																											.	.
Query Sequence		P	F	M	A	Y	A	.	.	T	P	E	Q	A	F	E	N	A	A	T	V	M	R	A	G	A	N	M	V	K	I	E	G	G	E	W	L	V	E	T	V	Q	M	L	T	E	R	A	V	P	V	C	G	H	L	G	L	T	P	Q	S	V	N	I	F	G	G	.	.	Y	K	V	Q	G	R	G	D	E	A	G	D
Query Conservation								.	.																																																											.	.
Alig confidence								.	.																														.	.	.	.	.	.	.	.																						.	.
Template Conservation																																							.	.	.	.	.	.	.	.
Template Sequence		I	F	T	A	D	G	Q	L	D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	E	F	.	.	.	.	.	.	.	.	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	G	T	G	G	T	N	A	R
Template Known Secondary structure			B		T	T	S	S	B															T	T		S					S	S	T	T	T	T	G	.	.	.	.	.	.	.	.	G	G	S																	T	T	S	S								S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60									.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.							.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																							.	.	.	.	.	.							.	.	.
Query SS confidence																							.	.	.	.	.	.							.	.	.
Query Sequence		Q	L	L	S	D	A	L	A	L	E	A	A	G	A	Q	L	L	V	L	E	C	.	.	.	.	.	.	V	P	V	E	L	A	.	.	.	K	R	I	T	E	A	L	A	I	P	V	I
Query Conservation																							.	.	.	.	.	.							.	.	.
Alig confidence																							.	.	.	.	.	.							.	.	.
Template Conservation
Template Sequence		E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T	L	P	V	X
Template Known Secondary structure														T		S								S	S	S																			S	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions