Job Description P31057 Confidence 82.63% Date Thu Jan 5 11:46:53 GMT 2012 Rank 256 Aligned Residues 197 % Identity 15% Template c2nx9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha; PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae Resolution 1.70 Å

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		30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.		.
Predicted Secondary structure														.																																																				.														.
Query SS confidence														.																																																				.														.
Query Sequence		A	K	L	F	A	D	E	G	L	N	V	M	.	L	V	G	D	S	L	G	M	T	V	Q	G	H	D	S	T	L	P	V	T	V	A	D	I	A	Y	H	T	A	A	V	R	R	G	A	P	N	C	L	L	L	A	D	L	P	F	M	A	Y	A	T	.	P	E	Q	A	F	E	N	A	A	T	V	M	R	.	A
Query Conservation														.																																																				.														.
Alig confidence														.																				.	.	.																														.														.
Template Conservation																																		.	.	.
Template Sequence		A	Q	Q	L	D	Q	I	G	Y	W	S	L	E	C	W	G	G	A	T	F	D	S	C	I	R	F	L	G	E	D	P	W	.	.	.	Q	R	L	R	L	L	K	Q	A	M	P	N	T	P	L	Q	M	L	L	R	G	Q	N	L	L	G	Y	R	H	Y	A	D	D	V	V	D	T	F	V	E	R	A	V	K	N
Template Known Secondary structure							T	S			S							T	T									T						.	.	.											T	T	S								G	G	G	T	T	S	S	S
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		107	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure														.	.	.	.																																																															.	.
Query SS confidence														.	.	.	.																																																															.	.
Query Sequence		G	A	N	M	V	K	I	E	G	G	E	W	.	.	.	.	L	V	E	T	V	Q	M	L	T	E	R	A	V	P	V	C	G	H	L	G	L	T	P	Q	S	V	N	I	F	G	G	Y	K	V	Q	G	R	G	D	E	A	G	D	Q	L	L	S	D	A	L	A	L	E	A	A	G	A	Q	L	L	V	L	.	.
Query Conservation														.	.	.	.																																																															.	.
Alig confidence														.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	M	D	V	F	R	V	F	D	A	M	N	D	V	R	N	M	Q	Q	A	L	Q	A	V	K	K	M	G	A	H	A	Q	G	T	L	C	Y	T	T	S	P	V	H	N	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	T	W	V	D	V	A	Q	Q	L	A	E	L	G	V	D	S	I	A	L	K	D
Template Known Secondary structure		T									T	T																	T													T	T			.	.	.	.	.	.	.	.	.	.	.	.	.														T	T		S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.														.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
					181	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200																																	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure		.	.	.						.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.						.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	E	C	V	P	V	.	.	.	E	L	A	K	R	I	T	E	A	L	A	I	P	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	G	A	G	N	V	T	D	G	Q	I	L	V	M	H	D	A	F	G	I	T
Query Conservation		.	.	.						.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.						.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	G	I	L	T	P	Y	A	A	E	E	L	V	S	T	L	K	K	Q	V	D	V	E	L	H	L	H	C	H	S	T	A	G	L	A	D	M	T	L	L	K	A	I	E	A	G	V	D	R	V	D	T	A	I	S	S	M	S	G	T	Y	G	H	P	A	T	E	S	L	V	A	T	L	Q	G	T	G	Y	D
Template Known Secondary structure		S	S	S																		S		S									T	T	S												T	T		S					B		G	G	G		S	T	T	S			B									T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	H	I	P	K	F	A	K	N	F	L	A	E	T	G	D	I	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	L	D	I	A	K	L	E	Q	I	A	A	Y	F	R	D	V	R	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions