Return to main results Retrieve Phyre Job Id

Job DescriptionP31057
Confidence84.37%DateThu Jan 5 11:46:53 GMT 2012
Rank239Aligned Residues152
% Identity16%Templatec1izcA_
PDB info PDB header:lyaseChain: A: PDB Molecule:macrophomate synthase intermolecular diels-alderase; PDBTitle: crystal structure analysis of macrophomate synthase
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10...... ... 20.........30.........40.........50....... ..60.........70.... .....80
Predicted Secondary structure 

.
..















..



.




Query SS confidence 









.


. .





































. .
















.





Query Sequence  SLLQKYKQEK. KRF. . ATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDST. . LPVTVADIAYHTAAVRR. GAPNCL
Query Conservation    

     
.  
..   



  

     

 
 





     

  

..  

  

  
   
 
.      
Alig confidence 









.


..























............

..
















.





Template Conservation    

  
  
     
      

   
  
  
 
 
 
............
 


          
 
          
Template Sequence  QALKDAMADPSKTLMGVAHGIPSTFVTKVLAATKPDFVWI. . . . . . . . . . . . DVEHGMFNRLELHDAIHAAQHHSEGRSL
Template Known Secondary structure 
GGG

S

T

S............TTTS


TTT
S
Template Predicted Secondary structure 











............













Template SS confidence 















































































   30.........40.........50.........60......... 70.........80.........90.......
 
   81........90.........100.........110.........120.........130.........140.
Predicted Secondary structure 



















...................
Query SS confidence 




























































. . . . . . . . . . . . . . . . . . .
Query Sequence  LLADLPFMAYATPEQAFENAATVMRAGANMVKIEGGEWLVETVQMLTERAVPVCGHLGLTP. . . . . . . . . . . . . . . . . . .
Query Conservation 



 
 
 
     
   
  
  


  




       
  
   



  



 
...................
Alig confidence 








.......












































...................
Template Conservation    



   .......   
   

 

 




 
 
 


   
 
 



 
 

        
            
Template Sequence  VIVRVPKHD. . . . . . . EVSLSTALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYN
Template Known Secondary structure 

TT
.......T
STT


S
TTT





STT
BTTTB


SSTT
TT
Template Predicted Secondary structure 




.......



































Template SS confidence 















































































   98.100...... ...110.........120.........130.........140.........150.........160.........170
 
   142.......150.........160.........170.........180
Predicted Secondary structure  .










Query SS confidence  .






































Query Sequence  . QSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVL
Query Conservation  .
      
  
 


   
   
  
 
  



  
 
Alig confidence  .



























...







Template Conservation     

    
   


  

 







...



 
 
Template Sequence  VATSNNHVCIIPQIESVKGVENVDAIAAM. . . PEIHGLMF
Template Known Secondary structure 

STT
...TT


Template Predicted Secondary structure 








...



Template SS confidence 







































   171........180.........190......... 200.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions