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Job DescriptionP31057
Confidence90.55%DateThu Jan 5 11:46:53 GMT 2012
Rank176Aligned Residues106
% Identity14%Templatec1djnB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:trimethylamine dehydrogenase; PDBTitle: structural and biochemical characterization of recombinant wild type2 trimethylamine dehydrogenase from methylophilus methylotrophus (sp.3 w3a1)
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110... ......120.........130.........140.........150.
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Query Sequence  PEQAFENAATVMRAGANMVKI. . . . . . . . . . . . . . . . . . . . . EGGEWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYK
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Template Sequence  QQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGS. . . . . DCAIATR
Template Known Secondary structure  TT
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   148.150.........160.........170.........180.........190.........200.........210..... ....220..
 
   152...... .160.........170.........180 .........190.........200...
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Query Sequence  VQGRGDE. . . . . AGDQLLSDALALEAAGAQLLVL. . . . . . . . . . . . . . . . . . . ECVPVELAKRITEALAIPVIGIG
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Template Sequence  FGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVG
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   223......230.........240.........250.........260.........270.........280.........290........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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