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Job Description | P31057 | Confidence | 90.55% | Date | Thu Jan 5 11:46:53 GMT 2012 |
Rank | 176 | Aligned Residues | 106 |
% Identity | 14% | Template | c1djnB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:trimethylamine dehydrogenase; |
PDBTitle: structural and biochemical characterization of recombinant wild type2 trimethylamine dehydrogenase from methylophilus methylotrophus (sp.3 w3a1)
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Resolution | 2.20 Å |
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93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
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. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
P | E | Q | A | F | E | N | A | A | T | V | M | R | A | G | A | N | M | V | K | I | . |
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E | G | G | E | W | L | V | E | T | V | Q | M | L | T | E | R | A | V | P | V | C | G | H | L | G | L | T | P | Q | S | V | N | I | F | G | G | Y | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | Q | F | Y | V | D | A | A | K | R | S | R | D | A | G | F | D | I | V | Y | V | Y | G | A | H | S | Y | L | P | L | Q | F | L | N | P | Y | Y | N | K | R | T | D | K | Y | G | G | S | L | E | N | R | A | R | F | W | L | E | T | L | E | K | V | K | H | A | V | G | S | . |
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D | C | A | I | A | T | R |
Template Known Secondary structure |   |
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| S | T | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | T | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | |
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. | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
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. | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | Q | G | R | G | D | E | . |
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A | G | D | Q | L | L | S | D | A | L | A | L | E | A | A | G | A | Q | L | L | V | L | . |
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E | C | V | P | V | E | L | A | K | R | I | T | E | A | L | A | I | P | V | I | G | I | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | G | V | D | T | V | Y | G | P | G | Q | I | E | A | E | V | D | G | Q | K | F | V | E | M | A | D | S | L | V | D | M | W | D | I | T | I | G | D | I | A | E | W | G | E | D | A | G | P | S | R | F | Y | Q | Q | G | H | T | I | P | W | V | K | L | V | K | Q | V | S | K | K | P | V | L | G | V | G |
Template Known Secondary structure |   |
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| T | T | T | T |  |  |  |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
223 | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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